Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0363
         (643 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2RLE2 Cluster: Magnesium and cobalt transport protein;...    35   1.9  
UniRef50_UPI00006CC403 Cluster: hypothetical protein TTHERM_0013...    34   3.4  
UniRef50_A0C1V2 Cluster: Chromosome undetermined scaffold_143, w...    33   4.4  

>UniRef50_A2RLE2 Cluster: Magnesium and cobalt transport protein;
           n=3; Lactococcus lactis|Rep: Magnesium and cobalt
           transport protein - Lactococcus lactis subsp. cremoris
           (strain MG1363)
          Length = 301

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 15/60 (25%), Positives = 33/60 (55%)
 Frame = +2

Query: 320 INIVLNSENHSVTPLYENEEKYLISRLNTQII*NVPTTVNKLVLLHITIIDQ*MFEYKRK 499
           + +   ++ + +  LY  E +YLI+++ +  + N P TV +L+ + + +I +  F Y  K
Sbjct: 76  VPVTFVAQKNRLITLYHPENEYLINQIKSYCLQNRPQTVYQLLFISLFLISEAFFPYLEK 135


>UniRef50_UPI00006CC403 Cluster: hypothetical protein
           TTHERM_00133620; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00133620 - Tetrahymena
           thermophila SB210
          Length = 367

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 16/50 (32%), Positives = 30/50 (60%)
 Frame = +2

Query: 302 ICLFL*INIVLNSENHSVTPLYENEEKYLISRLNTQII*NVPTTVNKLVL 451
           +CL+  I+ + N++NH++ P+ E  EK  + +   QI  N+    NK++L
Sbjct: 33  MCLYCRIDHIDNNKNHNIIPINEIAEKIQLLQKPQQIQNNIINQANKILL 82


>UniRef50_A0C1V2 Cluster: Chromosome undetermined scaffold_143,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_143,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 391

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 459 MCSSTSLLTVVGTF*MICVFNLEIRYFSSFSYRGVTEWFSEFK 331
           +C+  S+  + G+     VFNLE  YFS   Y    + FS FK
Sbjct: 319 LCTVQSIFIIKGSLIYSSVFNLEFAYFSGLGYYCDNQQFSMFK 361


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,979,695
Number of Sequences: 1657284
Number of extensions: 9581578
Number of successful extensions: 20909
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20896
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)