Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0363
         (643 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_13699| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_25794| Best HMM Match : rve (HMM E-Value=6.6e-17)                   27   9.8  

>SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4247

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 507  RYSRE-ERFLKSVFCPEHTCQCCAIV 581
            R+S E ERF   V+CP   C CC+ V
Sbjct: 925  RFSPEGERFNSFVYCPGIDCLCCSTV 950


>SB_13699| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 402

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 397 IKHTNHLKCAHYCQQTSAATH 459
           ++HT    CAHY  +TS  TH
Sbjct: 252 VQHTTRTVCAHYTPRTSHYTH 272


>SB_25794| Best HMM Match : rve (HMM E-Value=6.6e-17)
          Length = 267

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 290 YFPSFKSKNHLTDTRILATHENSRVRSFFDSY 195
           YF +F   NHL DTR  AT +  +++S F  Y
Sbjct: 47  YFSNFIKINHLEDTRTPATIK--KIKSHFSRY 76


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,751,626
Number of Sequences: 59808
Number of extensions: 303201
Number of successful extensions: 571
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)