Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0361
         (812 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4A599 Cluster: Putative uncharacterized protein; n=2; ...    36   0.92 
UniRef50_Q05FT1 Cluster: Putative RNA polymerase sigma factor rp...    36   1.6  
UniRef50_Q5CQQ7 Cluster: Large glycine-rich repeat low complexit...    36   1.6  
UniRef50_A2GMY3 Cluster: Putative uncharacterized protein; n=1; ...    35   2.8  
UniRef50_A5K7D8 Cluster: Putative uncharacterized protein; n=2; ...    34   4.9  
UniRef50_A2H0B2 Cluster: Dynein heavy chain, putative; n=6; Tric...    34   4.9  
UniRef50_A2FUL8 Cluster: Putative uncharacterized protein; n=1; ...    34   4.9  
UniRef50_Q8I2I8 Cluster: Putative uncharacterized protein PFI159...    33   6.5  

>UniRef50_Q4A599 Cluster: Putative uncharacterized protein; n=2;
           Mycoplasma synoviae 53|Rep: Putative uncharacterized
           protein - Mycoplasma synoviae (strain 53)
          Length = 253

 Score = 36.3 bits (80), Expect = 0.92
 Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = +3

Query: 435 RYNFNQRFSFSRHQHSELRNFKIKPHVYNRNIDFYKFIN*I*NRYMK*KNYIE--GKIFQ 608
           +YN N+ F++     S ++    K  ++NR+++    +N    +Y+K K  ++   K ++
Sbjct: 13  QYNENESFNYLYKVSSRMKYLYYKTRIFNRSLEVISAVNDFDEKYLKKKEILKFFEKYYK 72

Query: 609 F*MRPYYFDLSNRIFLL*TSFKNMYTYL 692
           +  + +Y D  N +       KN Y YL
Sbjct: 73  YLHKSFYVDNKNNL------IKNNYFYL 94


>UniRef50_Q05FT1 Cluster: Putative RNA polymerase sigma factor rpoD;
           n=1; Candidatus Carsonella ruddii PV|Rep: Putative RNA
           polymerase sigma factor rpoD - Carsonella ruddii (strain
           PV)
          Length = 320

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 39/113 (34%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
 Frame = -1

Query: 653 KDSVTQIKIVRAHLKLKYFTLDVIFLFHIAISNSIYKFIKINISVVNMWFY---FKIS*F 483
           K+   +I I+R  L LKY     IF F     N  + F+  N    N  F+   FKI+ F
Sbjct: 39  KNLFNKITILRKIL-LKYIFRIKIFRFFFKKINCFFFFL--NFIYKNTIFFKKRFKIN-F 94

Query: 482 TMLVS*KRESLVKVI---SFIKFNNLFNKFTNWIHMIAKYIFFLYKSTILFCK 333
            +L   K+  L K I    F  FNN  N F N  + I   IF +YK  I   K
Sbjct: 95  KILKIIKKNFLKKKIFFNCFSIFNNKINYFLNKNYFIKMLIFIIYKIKISIIK 147


>UniRef50_Q5CQQ7 Cluster: Large glycine-rich repeat low complexity
           protein; n=2; Cryptosporidium|Rep: Large glycine-rich
           repeat low complexity protein - Cryptosporidium parvum
           Iowa II
          Length = 1046

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 11/108 (10%)
 Frame = +2

Query: 17  TFKTHCES*DKLLSDYFL*KLTLKCQK----HCLILTNKISNLKRACLVCLAG*HFTPFG 184
           T    C S + L+ +  L    L  Q     H LI    +++L+   L+C+   H    G
Sbjct: 89  TVSISCNSLESLIRELELRSQILSIQGPALLHSLISNECLAHLEEMALICMNKKHSKYLG 148

Query: 185 CSCV-----KCEKSIEKT*RHFRKWQLF--FFKTIIPTHRTVYKESLN 307
           CS +     K  K I+K  R+  K   F   F TIIPT +  Y+   N
Sbjct: 149 CSIIRKSLYKVRKQIKKNNRYLLKIARFEEAFITIIPTLKGYYRSCGN 196


>UniRef50_A2GMY3 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 183

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = +2

Query: 233 FRKWQLFFFKTIIPTHRTV--YKESLNFFIS*RFAFYKTVLYFYIKKIYI*RS 385
           F +  L+FFKT++   +T+  + +++ +F      F+KT+LYF+   +Y  R+
Sbjct: 18  FSEQVLYFFKTMLYFFKTILYFFKTMLYFFKTMLYFFKTILYFFRTMLYFFRT 70


>UniRef50_A5K7D8 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 598

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
 Frame = -1

Query: 752 NNKCRNRGKIENVRITFLKF*VGIHVFKRCL**KDSVTQIKIVRAHLKLKYFTLDVIFLF 573
           N+ CRN  K  N+  TF K    +    +    K    +IK +  + KL +  LD    +
Sbjct: 413 NSLCRNIFK--NIDFTFHK---NVDEITKKQNQKKKKFKIKQISMYSKLLFSDLDNE-KY 466

Query: 572 HIAISNSIYKFIKINISVVNMWFYF-KIS*FTMLVS*KRESLVKV-ISFIKFNNLFNKF 402
            + I NS + F K+   V+N   YF  +  FT L+   +E   ++ I+ +K+N LF  F
Sbjct: 467 ILKICNSSFSFKKLKSVVINYLVYFLLLCIFTYLLKLYQERKYRIRITMVKYNYLFMLF 525


>UniRef50_A2H0B2 Cluster: Dynein heavy chain, putative; n=6;
           Trichomonas vaginalis G3|Rep: Dynein heavy chain,
           putative - Trichomonas vaginalis G3
          Length = 191

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = +2

Query: 230 HFRKWQLFFFKTIIPTHRTV--YKESLNFFIS*RFAFYKTVLYFYIKKIY 373
           +F K  L+FFKT++    T+  + +++ +F      F+KT+LYF+   +Y
Sbjct: 3   YFFKTMLYFFKTMLYKFSTMLYFFKTILYFFKTMLYFFKTMLYFFKTMLY 52


>UniRef50_A2FUL8 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1302

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = -1

Query: 449 VKVISFIKFNNLFNKFTNWIHMIAKYI-FFLYKSTILFCKMQNVMK*KSSDFLYIQFC 279
           ++VIS I F++LF K    +  I + I  +L+ + I+ CK+QNV K   S    I  C
Sbjct: 688 LQVISQIDFSDLFLKSITSLMRIKRIINVYLFNNNIVDCKLQNVFKHLESTIYEIICC 745


>UniRef50_Q8I2I8 Cluster: Putative uncharacterized protein PFI1590c;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PFI1590c - Plasmodium falciparum (isolate 3D7)
          Length = 1342

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = -1

Query: 587  VIFLFHIAISNSIY-KFIKINISVVNMWFYFKIS*FTMLVS*KRESLVKVISFIKFNNLF 411
            ++FL    + N I  ++I I I  + + F +KIS F ++V    ++++K+I     N LF
Sbjct: 943  LLFLLKYNVHNKILNEYILITILRIFLIFTYKISDFYVMVLLMIDNIIKLIINDSHNPLF 1002

Query: 410  NKFTNWIHMIAKYIFFLYKSTI 345
            N +     ++   I  +YKS +
Sbjct: 1003 NHYL--FELLTIIISLIYKSQV 1022


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,281,477
Number of Sequences: 1657284
Number of extensions: 13215146
Number of successful extensions: 26522
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26500
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)