Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0361
         (812 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016420-2|AAB65306.1|  291|Caenorhabditis elegans Serpentine re...    33   0.32 
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr...    29   5.2  
AC006790-5|AAF60733.1|  330|Caenorhabditis elegans Hypothetical ...    28   6.9  
Z81531-10|CAE17807.1|  367|Caenorhabditis elegans Hypothetical p...    28   9.1  

>AF016420-2|AAB65306.1|  291|Caenorhabditis elegans Serpentine
           receptor, class sx protein12 protein.
          Length = 291

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -1

Query: 452 LVKVISFIKFNNLFNKFTNWIHMIAKYIF-FLYKSTIL 342
           ++ V+ F+KF   +    NW +  + +IF FLY ST++
Sbjct: 100 MIDVLIFVKFPLFYRNLANWKYFSSCFIFVFLYSSTVI 137


>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
            F52B5.3 protein.
          Length = 1425

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 279  WVGIIVLKKNSCHFRK*RHVFSILF 205
            W  +  +KKN CHF + RH F   F
Sbjct: 1157 WYNVRSVKKNLCHFLRLRHKFMHFF 1181


>AC006790-5|AAF60733.1|  330|Caenorhabditis elegans Hypothetical
           protein Y49F6B.7 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 188 SCVKCEKSIEKT*RHFRKWQLFFFKTIIPTHRTV 289
           SC+K EK IE+   +F   Q+   K+ IP  RT+
Sbjct: 164 SCIKSEKCIEQVQSNFCCSQILEIKSEIPKTRTI 197


>Z81531-10|CAE17807.1|  367|Caenorhabditis elegans Hypothetical
           protein F36D3.13 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 608 LKYFTLDVIFLFHIAISNSIYKFIKINISVVNMWF 504
           LKY  L +I +  I IS  I K+++  I +  +WF
Sbjct: 154 LKYKLLPIISILLIIISLWIPKYLRYRIRIFGIWF 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,842,455
Number of Sequences: 27780
Number of extensions: 351720
Number of successful extensions: 765
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)