Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0360
         (455 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_27959| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_56201| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.4  
SB_33107| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.4  

>SB_27959| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 373

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 92  PTPLRCAEKTSILRKSVCNENSKNIFQKKL 3
           P PL C ++  +LRK VC+E  K + ++ L
Sbjct: 215 PRPL-CYDECDLLRKDVCSEEYKEVQKESL 243


>SB_56201| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 796

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -2

Query: 190 MEFSMRQIIALRTP*AFNFVNHLAY*VSSSLQIPLHSVVQRKHQF 56
           +EF + +II  R     N ++H+ Y V+ S  I L  ++ R+  F
Sbjct: 68  VEFVLYEIIKRRKTPPLNRIHHVCYLVAFSFGIILWEMISRRKPF 112


>SB_33107| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1079

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 322 EFSCEFSCENVKRRTQCCVSQG 387
           E SC FS E V  +++ CV QG
Sbjct: 197 EKSCPFSAEKVASKSRSCVCQG 218


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,279,729
Number of Sequences: 59808
Number of extensions: 201683
Number of successful extensions: 391
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 920703675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)