Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0360
         (455 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   0.68 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   1.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   2.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   2.7  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   3.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   6.3  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 289 FLTAYDLRFSGSFKFLCYEFNI 224
           F+T  D+  + +FK + Y FN+
Sbjct: 518 FITQSDIELANTFKAIIYGFNV 539


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 165 IICRILNSIVAPFKMISSDN 224
           ++C IL SI+ PF  +  D+
Sbjct: 369 LVCGILGSILVPFFYVQEDD 388


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 1   LNFFWKMFFEFSLQTDFRKI 60
           L  F +MFFEF   + + KI
Sbjct: 67  LELFGRMFFEFCQDSGYDKI 86


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 1   LNFFWKMFFEFSLQTDFRKI 60
           L  F +MFFEF   + + KI
Sbjct: 67  LELFGRMFFEFCQDSGYDKI 86


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 5/20 (25%), Positives = 14/20 (70%)
 Frame = -2

Query: 415 EWIRKTFRFLLETRSIASCV 356
           +W+++  R  L+ + +++CV
Sbjct: 203 QWLKENSRLALKPKDVSNCV 222


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 276 MICDLVGVLNSCAMNLIYY 220
           ++C    +LN CA++L  Y
Sbjct: 106 VMCSTASILNLCAISLDRY 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,157
Number of Sequences: 438
Number of extensions: 2085
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)