Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0356
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
            H08M01.2b protein.
          Length = 1341

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
 Frame = -2

Query: 261  AKRPPPIGRVNIRAHLVRCEPYNYHNTWHQDCEL-------PECIPTTPPLQFPNNSQNE 103
            ++RP P+   N+R  + R +P    + + Q  E+       PE +  +P     N++ + 
Sbjct: 860  SRRPKPVVNSNLRNRVTRTDPLIMSHFYSQPIEIQPAPLATPEAVDFSPAYSLVNDAVHT 919

Query: 102  L*HTGNSQALIPRNVTLHNYRSN 34
            +     S  L     T H+Y S+
Sbjct: 920  VIQVNGSTPL-KSPPTFHSYESS 941


>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
            H08M01.2a protein.
          Length = 1320

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
 Frame = -2

Query: 261  AKRPPPIGRVNIRAHLVRCEPYNYHNTWHQDCEL-------PECIPTTPPLQFPNNSQNE 103
            ++RP P+   N+R  + R +P    + + Q  E+       PE +  +P     N++ + 
Sbjct: 860  SRRPKPVVNSNLRNRVTRTDPLIMSHFYSQPIEIQPAPLATPEAVDFSPAYSLVNDAVHT 919

Query: 102  L*HTGNSQALIPRNVTLHNYRSN 34
            +     S  L     T H+Y S+
Sbjct: 920  VIQVNGSTPL-KSPPTFHSYESS 941


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,139,914
Number of Sequences: 27780
Number of extensions: 302502
Number of successful extensions: 615
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)