Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0355
         (779 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20020| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.26 
SB_16857| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.26 
SB_2769| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   2.4  

>SB_20020| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 73

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +3

Query: 483 VDGLD*DSFVPVLGWYIVWKCCLSKFRFVRELLGG 587
           +D LD + F     W++VWK  L +F F+REL+ G
Sbjct: 7   IDYLDWEEFC----WFVVWKMFLVRFSFIRELVYG 37


>SB_16857| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 73

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +3

Query: 483 VDGLD*DSFVPVLGWYIVWKCCLSKFRFVRELLGG 587
           +D LD + F     W++VWK  L +F F+REL+ G
Sbjct: 7   IDYLDWEEFC----WFVVWKMFLVRFSFIRELVYG 37


>SB_2769| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 68

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 84  NILDPVLIFLCANFFHWVSSLRVDVFGLD 170
           N+LD V IFLC +F  W+  +R+D    D
Sbjct: 6   NLLDRVQIFLCFDFL-WIDFVRIDFLRTD 33


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,812,155
Number of Sequences: 59808
Number of extensions: 377172
Number of successful extensions: 680
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)