BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0355
(779 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061279-1|AAL28827.1| 196|Drosophila melanogaster LD19812p pro... 91 2e-18
AE014296-1789|AAN11944.1| 196|Drosophila melanogaster CG11989-P... 91 2e-18
AE014296-1788|AAN11943.1| 196|Drosophila melanogaster CG11989-P... 91 2e-18
AE014296-1787|AAN11942.1| 196|Drosophila melanogaster CG11989-P... 91 2e-18
AE014296-1786|AAN11941.1| 196|Drosophila melanogaster CG11989-P... 91 2e-18
AE014296-1785|AAF50178.1| 196|Drosophila melanogaster CG11989-P... 91 2e-18
AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-P... 30 3.1
>AY061279-1|AAL28827.1| 196|Drosophila melanogaster LD19812p
protein.
Length = 196
Score = 90.6 bits (215), Expect = 2e-18
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +3
Query: 663 MNIRCARPSDLMNMQHCNLLCLPENYQMKYYFYHGLSWP 779
MNIRCA+P DLM MQHCNLLCLPENYQMKYYFYHGL+WP
Sbjct: 1 MNIRCAKPEDLMTMQHCNLLCLPENYQMKYYFYHGLTWP 39
>AE014296-1789|AAN11944.1| 196|Drosophila melanogaster CG11989-PE,
isoform E protein.
Length = 196
Score = 90.6 bits (215), Expect = 2e-18
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +3
Query: 663 MNIRCARPSDLMNMQHCNLLCLPENYQMKYYFYHGLSWP 779
MNIRCA+P DLM MQHCNLLCLPENYQMKYYFYHGL+WP
Sbjct: 1 MNIRCAKPEDLMTMQHCNLLCLPENYQMKYYFYHGLTWP 39
>AE014296-1788|AAN11943.1| 196|Drosophila melanogaster CG11989-PD,
isoform D protein.
Length = 196
Score = 90.6 bits (215), Expect = 2e-18
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +3
Query: 663 MNIRCARPSDLMNMQHCNLLCLPENYQMKYYFYHGLSWP 779
MNIRCA+P DLM MQHCNLLCLPENYQMKYYFYHGL+WP
Sbjct: 1 MNIRCAKPEDLMTMQHCNLLCLPENYQMKYYFYHGLTWP 39
>AE014296-1787|AAN11942.1| 196|Drosophila melanogaster CG11989-PC,
isoform C protein.
Length = 196
Score = 90.6 bits (215), Expect = 2e-18
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +3
Query: 663 MNIRCARPSDLMNMQHCNLLCLPENYQMKYYFYHGLSWP 779
MNIRCA+P DLM MQHCNLLCLPENYQMKYYFYHGL+WP
Sbjct: 1 MNIRCAKPEDLMTMQHCNLLCLPENYQMKYYFYHGLTWP 39
>AE014296-1786|AAN11941.1| 196|Drosophila melanogaster CG11989-PB,
isoform B protein.
Length = 196
Score = 90.6 bits (215), Expect = 2e-18
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +3
Query: 663 MNIRCARPSDLMNMQHCNLLCLPENYQMKYYFYHGLSWP 779
MNIRCA+P DLM MQHCNLLCLPENYQMKYYFYHGL+WP
Sbjct: 1 MNIRCAKPEDLMTMQHCNLLCLPENYQMKYYFYHGLTWP 39
>AE014296-1785|AAF50178.1| 196|Drosophila melanogaster CG11989-PA,
isoform A protein.
Length = 196
Score = 90.6 bits (215), Expect = 2e-18
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +3
Query: 663 MNIRCARPSDLMNMQHCNLLCLPENYQMKYYFYHGLSWP 779
MNIRCA+P DLM MQHCNLLCLPENYQMKYYFYHGL+WP
Sbjct: 1 MNIRCAKPEDLMTMQHCNLLCLPENYQMKYYFYHGLTWP 39
>AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-PA
protein.
Length = 2294
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 591 TYHLVVLEQIEIWINSTSKQCTNLEQEQRSLSLNHQHHVNQSQ 463
TYH +L+ IE + +Q T +Q Q+ L HQH + Q Q
Sbjct: 184 TYHPRLLKPIEKQ-RTQKQQATQQQQIQQQQQLQHQHQMQQQQ 225
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,041,994
Number of Sequences: 53049
Number of extensions: 549814
Number of successful extensions: 1436
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -