Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0355
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047659-11|AAC04428.1|  182|Caenorhabditis elegans Hypothetical...    80   2e-15
U23524-5|AAC46821.2|  252|Caenorhabditis elegans Hypothetical pr...    31   0.70 

>AF047659-11|AAC04428.1|  182|Caenorhabditis elegans Hypothetical
           protein K07H8.3 protein.
          Length = 182

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = +3

Query: 663 MNIRCARPSDLMNMQHCNLLCLPENYQMKYYFYHGLSWP 779
           MNIRCAR  DLM+MQ+ NL+CLPENYQMKYYFYH LSWP
Sbjct: 1   MNIRCARVDDLMSMQNANLMCLPENYQMKYYFYHALSWP 39


>U23524-5|AAC46821.2|  252|Caenorhabditis elegans Hypothetical
           protein C29F5.2 protein.
          Length = 252

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 693 LMNMQHCNLLCLPENYQMKYYFYHGLS 773
           ++++QHC L C   NY   +Y + GLS
Sbjct: 119 IVDLQHCTLPCKSINYNFHFYSFKGLS 145


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,947,676
Number of Sequences: 27780
Number of extensions: 298231
Number of successful extensions: 634
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)