Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0355
         (779 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g13780.1 68418.m01607 GCN5-related N-acetyltransferase, putat...    64   8e-11
At2g31480.1 68415.m03845 expressed protein contains Pfam profile...    33   0.28 
At3g45530.1 68416.m04917 DC1 domain-containing protein contains ...    28   8.0  

>At5g13780.1 68418.m01607 GCN5-related N-acetyltransferase, putative
           similar to SP|P07347 N-terminal acetyltransferase
           complex ARD1 subunit (Arrest-defective protein 1)
           {Saccharomyces cerevisiae}; contains Pfam profile
           PF00583: acetyltransferase, GNAT family
          Length = 192

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 27/37 (72%), Positives = 29/37 (78%)
 Frame = +3

Query: 669 IRCARPSDLMNMQHCNLLCLPENYQMKYYFYHGLSWP 779
           IR A   DL+ MQ CNL+CLPENYQMKYY YH LSWP
Sbjct: 4   IRRATVDDLLAMQACNLMCLPENYQMKYYLYHILSWP 40


>At2g31480.1 68415.m03845 expressed protein contains Pfam profile
           PF03754: Domain of unknown function (DUF313)
          Length = 472

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 594 LTYHLVVLEQIEIWINSTSKQCTNLEQEQRSLSLNHQHHVNQSQSLKT 451
           +++H  V E+I  W++S +    +L QE  S S    HH   S++ KT
Sbjct: 125 VSFHFSVDEKIVSWLSSVANSSLSLNQESTS-SNKENHHQKSSKNTKT 171


>At3g45530.1 68416.m04917 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 692

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = +3

Query: 45  NFSN*LNFEVCTQNILDPVLIFLCANFFHWVSSLRVDVFGLDQPKWRYEFVGQKHISLIT 224
           NF+  +  +VC  N +D  +   C  F  WV +  V    +D P+  +    +  + L+T
Sbjct: 132 NFATNMTCDVCYDNHVDGYICLCCRLFVGWVCAALV----IDSPEITHPCHTKHPLKLLT 187

Query: 225 ENS 233
           E +
Sbjct: 188 EGA 190


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,670,030
Number of Sequences: 28952
Number of extensions: 261829
Number of successful extensions: 590
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1746037600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)