Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0351
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    28   0.093
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    24   1.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   1.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   1.5  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    24   1.5  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   2.6  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   3.5  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   8.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   8.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   8.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   8.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.1  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 164 PTNTDSSQPARASPLRLQPSSTSRPGTRDSDPGSRREVD 280
           PT T  S+P +AS    + S+T +P T  + P S  E D
Sbjct: 403 PTQTTESEPTQASEQPTESSTTQKPQTTKT-PESGNESD 440


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 353 PVPNRNHNPSTAPPPLVHNPSHN 421
           P+    HNP+ +PPP   +P +N
Sbjct: 17  PLLTPPHNPAYSPPPSYCDPWYN 39


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +2

Query: 341 RPRDPVPNRNHNPSTAPPPLVHNPSHNNNTDRPRNLSNSTDRTPNHNSN 487
           R  D    RN+ PST+     +N  HNNN +   N  +     PN N N
Sbjct: 357 RSSDEQQWRNNQPSTS-----NNRWHNNNGNNSNN--HWRKNNPNDNRN 398


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = +2

Query: 320 TRNPRLHRPRDPVP-NRNHNPSTAPPPLVHNPSHNNNTDRPRNLSNSTDRT 469
           TR    +    P P  R  + S +PPP V+NP  +     P +    T  T
Sbjct: 256 TRTTLKNNRASPYPMQRPKSASLSPPPHVYNPPDHIQQATPYSAPGPTYST 306


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = +2

Query: 158 TAPTNTDSSQPARASPLRLQPSSTSRPGTRDSDPGSRREVDHSTEPRLHNQTMTTRNPRL 337
           T+PT    +     S     PS T+ P  RDS         +  +P+LH  T +T +P +
Sbjct: 154 TSPTPVSINNNTSTSSSASSPSVTAAPHLRDS--------PNYIKPQLHVSTGSTSSPTI 205


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -2

Query: 199 CPRRLAGIRICWR-RTQSLVACQCRPC 122
           CP+   G R   +  T++ + C CRPC
Sbjct: 104 CPKAKPGERKFIKVTTKAPLECMCRPC 130


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +2

Query: 341 RPRDPVPNRNHNPSTAPPPLVHNPSHNNNTDRPRNLSNS 457
           RP  P P     P    P   ++P  N++++     SNS
Sbjct: 22  RPHSPEPYPPRCPPIYEPSCQYSPVSNSDSENSEVSSNS 60


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/31 (32%), Positives = 11/31 (35%)
 Frame = +2

Query: 164 PTNTDSSQPARASPLRLQPSSTSRPGTRDSD 256
           P N D   P    PL   P+S       D D
Sbjct: 84  PVNDDVRSPGTPGPLSQAPASQQSLDASDPD 114


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
 Frame = +2

Query: 302 HNQTMTTRNPRLHRPRDPVPNRNHNPSTA---PPPLVH 406
           HNQ+ + R P+  R      N  + P T+   PP   H
Sbjct: 210 HNQSRSKRQPKTGREDQTRRNPYYRPRTSRTEPPRRKH 247


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 275 PPCDFPGLSPSSLVDS 228
           PP +FP  S SS ++S
Sbjct: 215 PPAEFPTTSSSSALES 230


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/31 (32%), Positives = 11/31 (35%)
 Frame = +2

Query: 164 PTNTDSSQPARASPLRLQPSSTSRPGTRDSD 256
           P N D   P    PL   P+S       D D
Sbjct: 240 PVNDDVRSPGTPGPLSQAPASQQSLDASDPD 270


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 275 PPCDFPGLSPSSLVDS 228
           PP +FP  S SS ++S
Sbjct: 4   PPAEFPTTSSSSALES 19


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 275 PPCDFPGLSPSSLVDS 228
           PP +FP  S SS ++S
Sbjct: 4   PPAEFPTTSSSSALES 19


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 275 PPCDFPGLSPSSLVDS 228
           PP +FP  S SS ++S
Sbjct: 215 PPAEFPTTSSSSALES 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.311    0.131    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,846
Number of Sequences: 336
Number of extensions: 3382
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)