Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0350
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81485-2|CAB03974.2|  708|Caenorhabditis elegans Hypothetical pr...    32   0.34 
Z82266-1|CAB05178.2|  626|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p...    28   5.5  
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p...    28   5.5  
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p...    28   5.5  
U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein.        28   5.5  
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ...    28   5.5  
AF067607-7|AAF98613.1|  433|Caenorhabditis elegans Serpentine re...    27   9.6  

>Z81485-2|CAB03974.2|  708|Caenorhabditis elegans Hypothetical
           protein C49F5.2 protein.
          Length = 708

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 130 INSFTSAVCPCLCCRQ*LYCIPQIADSHERRRLHTFR*TVY 252
           +N F +  CPC    Q L    +  D++E+ + HTF+  +Y
Sbjct: 377 VNCFDNKDCPCFIANQFLQSRNKTTDTNEKLKFHTFQPLMY 417


>Z82266-1|CAB05178.2|  626|Caenorhabditis elegans Hypothetical
           protein F23B2.3 protein.
          Length = 626

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/66 (22%), Positives = 31/66 (46%)
 Frame = -1

Query: 492 THVRNHRNVFKWKTFYQPLLIIDRLLSNRYLFHYQCY*IVTQLLGLEIIFRLAYLASEKL 313
           T +   + +FK K  +  L  +  +L +  L  YQC+ +    L   I+ ++++L  E  
Sbjct: 77  TTMHGPKRIFKGKRIFTKLFWLIMVLGSLGLLIYQCWILSASYLSKPIVSQVSFLIPEDG 136

Query: 312 KALPTM 295
              P++
Sbjct: 137 MEFPSV 142


>Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical
           protein F17C11.9c protein.
          Length = 365

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +2

Query: 461 LNTLRWFRTCV--I*IERLLGYCMISASLLKFSIA*KLTEISYVVGTFA 601
           +N  RWFRT V    ++ +LG   +++S+ +F+ A K TE+S  V   A
Sbjct: 130 VNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQA-KFTELSAKVAKSA 177


>Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical
           protein F17C11.9b protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +2

Query: 461 LNTLRWFRTCV--I*IERLLGYCMISASLLKFSIA*KLTEISYVVGTFA 601
           +N  RWFRT V    ++ +LG   +++S+ +F+ A K TE+S  V   A
Sbjct: 138 VNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQA-KFTELSAKVAKSA 185


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +2

Query: 461 LNTLRWFRTCV--I*IERLLGYCMISASLLKFSIA*KLTEISYVVGTFA 601
           +N  RWFRT V    ++ +LG   +++S+ +F+ A K TE+S  V   A
Sbjct: 163 VNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQA-KFTELSAKVAKSA 210


>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
           protein 2, isoform a protein.
          Length = 1538

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -3

Query: 682 EFFNVLDRVKVNSNLYAVRTAPLAAKAGKRSNYIRNFS*LLSYREL 545
           +F+N+LD + V   L+A   A     AGK  N I++   L   R L
Sbjct: 802 DFWNILDGIVVTCALFAFGFAGTEGSAGKNLNTIKSLRVLRVLRPL 847


>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
           protein 2, isoform c protein.
          Length = 1926

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -3

Query: 682 EFFNVLDRVKVNSNLYAVRTAPLAAKAGKRSNYIRNFS*LLSYREL 545
           +F+N+LD + V   L+A   A     AGK  N I++   L   R L
Sbjct: 802 DFWNILDGIVVTCALFAFGFAGTEGSAGKNLNTIKSLRVLRVLRPL 847


>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
            protein 2, isoform b protein.
          Length = 2027

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -3

Query: 682  EFFNVLDRVKVNSNLYAVRTAPLAAKAGKRSNYIRNFS*LLSYREL 545
            +F+N+LD + V   L+A   A     AGK  N I++   L   R L
Sbjct: 921  DFWNILDGIVVTCALFAFGFAGTEGSAGKNLNTIKSLRVLRVLRPL 966


>U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein.
          Length = 1053

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -3

Query: 682 EFFNVLDRVKVNSNLYAVRTAPLAAKAGKRSNYIRNFS*LLSYREL 545
           +F+N+LD + V   L+A   A     AGK  N I++   L   R L
Sbjct: 408 DFWNILDGIVVTCALFAFGFAGTEGSAGKNLNTIKSLRVLRVLRPL 453


>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
            activated calciumchannel alpha-1 subunit protein.
          Length = 2027

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -3

Query: 682  EFFNVLDRVKVNSNLYAVRTAPLAAKAGKRSNYIRNFS*LLSYREL 545
            +F+N+LD + V   L+A   A     AGK  N I++   L   R L
Sbjct: 921  DFWNILDGIVVTCALFAFGFAGTEGSAGKNLNTIKSLRVLRVLRPL 966


>AF067607-7|AAF98613.1|  433|Caenorhabditis elegans Serpentine
           receptor, class t protein59 protein.
          Length = 433

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 581 YVVGTFACFCR*GRCSNCIQI*VN 652
           YV G   C C  G CS CI +  N
Sbjct: 246 YVAGAIGCGCWMGSCSTCILLAAN 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,503,668
Number of Sequences: 27780
Number of extensions: 252420
Number of successful extensions: 543
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)