Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0349
         (705 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0514 - 3706178-3706787,3709334-3709441,3710425-3710810           30   1.6  
07_03_0496 - 18758767-18760113                                         28   8.3  
03_05_0227 + 22133847-22133951,22134648-22135047,22135452-221355...    28   8.3  
02_01_0023 + 146841-147002,147962-148036,148181-148234,148284-14...    28   8.3  

>06_01_0514 - 3706178-3706787,3709334-3709441,3710425-3710810
          Length = 367

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -3

Query: 196 KYFRTARFKIVCVRQTVDFDTKRVGEVLVTSLVPKERMYCKCFLLQ 59
           +++ T   +   +  + DFD   +  +L+T    K+ MY  CF +Q
Sbjct: 121 RFWTTEEHRATLIYSSYDFDDPLITNLLITMTRMKKNMYFLCFTMQ 166


>07_03_0496 - 18758767-18760113
          Length = 448

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 155 PDAYDFESCCPKIFQRGLGFF-LTKTW 232
           PD +D +S   + F R +GFF L +TW
Sbjct: 414 PDVWDLKSGTRRPFTRSIGFFDLDRTW 440


>03_05_0227 +
           22133847-22133951,22134648-22135047,22135452-22135561,
           22135869-22135955
          Length = 233

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 113 KHLTDSLRVKIDRLPDAYDFESCCP 187
           KH +D L +  +++ D +DFE  CP
Sbjct: 140 KHHSDGLHIGKEQVHDLFDFEDDCP 164


>02_01_0023 +
           146841-147002,147962-148036,148181-148234,148284-148388,
           148736-148836,148937-148992,149284-149324,149427-149527,
           149629-149724,149905-149969,150048-150119,150537-150772,
           150874-150904,151020-151165,151264-151365,151469-151513,
           151614-151780,151812-152214
          Length = 685

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
 Frame = -2

Query: 209 LAPVEIFSDSKIQNRMRQANGRF*HEASR*GA------CDIAGSKRTYVL*MFSITK*YR 48
           LA ++ F DSK  + + +  G     A+  G         I GS   Y L M+ +TK  +
Sbjct: 457 LAAIDWFKDSKRMDNVGRQKGCVAQVAAEKGMHTFVANIQIPGSTH-YSLVMYFVTKSLK 515

Query: 47  SFYLKKRPFENDDEF 3
              L +R F+ DDEF
Sbjct: 516 KGSLLQRFFDGDDEF 530


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,180,009
Number of Sequences: 37544
Number of extensions: 254512
Number of successful extensions: 428
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)