Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0349
         (705 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97012-9|AAK39142.2|  995|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical ...    28   7.5  
AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical ...    28   7.5  

>U97012-9|AAK39142.2|  995|Caenorhabditis elegans Hypothetical
           protein C04E6.11 protein.
          Length = 995

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
 Frame = +2

Query: 161 AYDFESCCPKIFQRGLGFFLTKTWYKRI-IKCYVRGKRKII----VFVMLDFYLC 310
           AY+  +  P       GFF T+T YK++ +KC+ R +R+ +    V  ++DF  C
Sbjct: 695 AYELRTLFPHATCYYEGFFETQTEYKKLFVKCFERLERQGLTTSTVDELIDFLRC 749


>AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2b protein.
          Length = 700

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 202 PLKYFRTARFKIVCVRQTVDFD 137
           P  +F T + +IVC R +VDFD
Sbjct: 133 PKDFFSTPKKRIVCNRNSVDFD 154


>AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2a protein.
          Length = 741

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 202 PLKYFRTARFKIVCVRQTVDFD 137
           P  +F T + +IVC R +VDFD
Sbjct: 174 PKDFFSTPKKRIVCNRNSVDFD 195


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,012,642
Number of Sequences: 27780
Number of extensions: 254391
Number of successful extensions: 536
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)