BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0347 (759 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_30331| Best HMM Match : Amidase (HMM E-Value=0) 87 1e-17 SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16 SB_1176| Best HMM Match : Amidase (HMM E-Value=4.5) 38 0.009 SB_10485| Best HMM Match : DUF1033 (HMM E-Value=0.19) 33 0.25 SB_3668| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58 SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3 SB_10648| Best HMM Match : 7TM-7TMR_HD (HMM E-Value=3.4) 30 2.3 SB_20217| Best HMM Match : Amidase (HMM E-Value=2.3e-21) 29 5.4 SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_20574| Best HMM Match : Extensin_2 (HMM E-Value=0.25) 28 9.5 SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2) 28 9.5 >SB_30331| Best HMM Match : Amidase (HMM E-Value=0) Length = 555 Score = 87.0 bits (206), Expect = 1e-17 Identities = 39/93 (41%), Positives = 59/93 (63%) Frame = -3 Query: 724 IKTEFETILSDDAVLVFPTFPHPAHLHYRVYYKFLNCGYLTMFNALGLPVTACPIEMSKK 545 ++ + E++L D+ VL+FP+ P A H L+ Y ++FN L +PVT CP+ + + Sbjct: 450 LRLQLESLLGDNGVLLFPSHPRTAMPHGMPVLSPLDFNYTSIFNVLRMPVTQCPLGLDSE 509 Query: 544 GLPVGIQIAANRYKDHLTVAVANEFEKAFGGWA 446 G+P+GIQIAA D LT+AVA E+ FGGW+ Sbjct: 510 GMPLGIQIAAACNNDRLTLAVARALEQKFGGWS 542 >SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 379 Score = 84.2 bits (199), Expect = 1e-16 Identities = 38/94 (40%), Positives = 57/94 (60%) Frame = -3 Query: 730 EDIKTEFETILSDDAVLVFPTFPHPAHLHYRVYYKFLNCGYLTMFNALGLPVTACPIEMS 551 ++++ E + IL ++ VL+FP+ P A H + N Y +FN L +P T CP +S Sbjct: 276 QELRQELQRILGENGVLIFPSHPTLALRHNMPMFYPFNFAYTGIFNVLYMPSTQCPAGLS 335 Query: 550 KKGLPVGIQIAANRYKDHLTVAVANEFEKAFGGW 449 K GLP+G+Q+ A +DHLT+AVA E+ GGW Sbjct: 336 KSGLPMGVQVVAANGQDHLTLAVAMVIEELVGGW 369 >SB_1176| Best HMM Match : Amidase (HMM E-Value=4.5) Length = 160 Score = 37.9 bits (84), Expect = 0.009 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 11/109 (10%) Frame = -3 Query: 757 YYKNLLTKFEDIKTE----FETILSDDAVLVFPTFPH--PAHLHYRVYYK-FLNCGYLTM 599 YY +K ++++ E ++ LS VL+ PT P P V K F++ +L + Sbjct: 45 YYGFFYSKSQNLRRELTRAYDEALSKYHVLIMPTVPKRTPKIPDITVSIKEFVHTAFLQI 104 Query: 598 FNALGLPVTACPIEM----SKKGLPVGIQIAANRYKDHLTVAVANEFEK 464 N ++ P S GLPVG+ I R+ D + + VA+ +EK Sbjct: 105 CNTAPFDLSGHPALSINAGSSHGLPVGMMIVGRRFDDAMVLNVAHAYEK 153 >SB_10485| Best HMM Match : DUF1033 (HMM E-Value=0.19) Length = 294 Score = 33.1 bits (72), Expect = 0.25 Identities = 16/56 (28%), Positives = 29/56 (51%) Frame = -3 Query: 634 YYKFLNCGYLTMFNALGLPVTACPIEMSKKGLPVGIQIAANRYKDHLTVAVANEFE 467 Y +F+ G LT G+P P+ GLP+ +Q+ + +++H + VA+ E Sbjct: 188 YTRFMQLGNLT-----GVPCMTLPVGYDGNGLPISLQVMSGWWQEHKMLRVAHACE 238 >SB_3668| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 457 Score = 31.9 bits (69), Expect = 0.58 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Frame = -3 Query: 715 EFETILSDDAVLVFPTFPHPAHLHYRVYY------KFLNCGYLTMFNALGLPVT 572 E+ TI + + FPT P P +HYR Y +F+ YL + + L P T Sbjct: 278 EYVTIQAVITTMAFPTAPFPPRVHYRYYIFIFLAGEFIARSYLAVISTLVKPET 331 >SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1010 Score = 30.7 bits (66), Expect = 1.3 Identities = 23/81 (28%), Positives = 33/81 (40%) Frame = +2 Query: 248 CTMY*KPKHYLVKYNYIYFLHDFSVLSYQPFLIFQNDSMVTCDVCLNYTNIILRFTLYCN 427 CT P+ +LV ++ + H V S+ D CDVC + I RF+ +C Sbjct: 125 CTSCFNPQRHLVHHHPLRVAHTDIVYSH-------TDGNWVCDVCRQTSRINERFSHHCE 177 Query: 428 RIFIRSCPATECFLKFISDRH 490 C +CF K I H Sbjct: 178 DCEFDVC--RDCFRKHIIPSH 196 >SB_10648| Best HMM Match : 7TM-7TMR_HD (HMM E-Value=3.4) Length = 272 Score = 29.9 bits (64), Expect = 2.3 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = -3 Query: 211 NCLIHIVM-RMSYLKGLVHFSISF*CDLCIGNPLFKYRSVVLL 86 +C+ HIV+ +SY + S+S C + I +P ++YR+ V+L Sbjct: 169 SCICHIVIVYLSYRYRVSVISLSCICHIVIVHPSYRYRASVIL 211 >SB_20217| Best HMM Match : Amidase (HMM E-Value=2.3e-21) Length = 457 Score = 28.7 bits (61), Expect = 5.4 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 8/105 (7%) Frame = -3 Query: 757 YYKNLLTKFEDIKTEFETILSDDAVLVFPTFPHPAHL--HYRVYYKFLNCGY------LT 602 YY + +++ L+ VLV PT P A L K L Y Sbjct: 345 YYSKAQNLAMKLGRDYDDALTKADVLVMPTNPMKARLLPTKETSVKDLLGKYGGHYINTC 404 Query: 601 MFNALGLPVTACPIEMSKKGLPVGIQIAANRYKDHLTVAVANEFE 467 F+ G P + +S GLPVG+ I +Y + + VA FE Sbjct: 405 PFDLTGHPALSINAGLSD-GLPVGLMIVGKKYDEETILRVAYAFE 448 >SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 654 Score = 28.3 bits (60), Expect = 7.2 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +3 Query: 216 PQLISTV*ILHARCTKNPNIIWSNITIYIFYTIFLCYHINHS 341 P I+ + ++H R +P + S I + TI C+H HS Sbjct: 568 PSCIAIITVIHHRLNHHPALPSSPSFIIVSITILHCHHHRHS 609 >SB_20574| Best HMM Match : Extensin_2 (HMM E-Value=0.25) Length = 1508 Score = 27.9 bits (59), Expect = 9.5 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -2 Query: 590 IRAASYGLSD*NVEKRPPCRHPNCGKQIQRS 498 +RAA Y +S + E RP RHP G RS Sbjct: 1182 LRAAPYKISSRSPESRPSDRHPRHGYNEPRS 1212 >SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2) Length = 1706 Score = 27.9 bits (59), Expect = 9.5 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -2 Query: 590 IRAASYGLSD*NVEKRPPCRHPNCGKQIQRS 498 +RAA Y +S + E RP RHP G RS Sbjct: 579 LRAAPYKISSRSPESRPSDRHPRHGYNEPRS 609 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,354,879 Number of Sequences: 59808 Number of extensions: 464614 Number of successful extensions: 800 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 715 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 799 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2070332524 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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