SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0347
         (759 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_30331| Best HMM Match : Amidase (HMM E-Value=0)                     87   1e-17
SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.)              84   1e-16
SB_1176| Best HMM Match : Amidase (HMM E-Value=4.5)                    38   0.009
SB_10485| Best HMM Match : DUF1033 (HMM E-Value=0.19)                  33   0.25 
SB_3668| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.58 
SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.3  
SB_10648| Best HMM Match : 7TM-7TMR_HD (HMM E-Value=3.4)               30   2.3  
SB_20217| Best HMM Match : Amidase (HMM E-Value=2.3e-21)               29   5.4  
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_20574| Best HMM Match : Extensin_2 (HMM E-Value=0.25)               28   9.5  
SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2)                28   9.5  

>SB_30331| Best HMM Match : Amidase (HMM E-Value=0)
          Length = 555

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 39/93 (41%), Positives = 59/93 (63%)
 Frame = -3

Query: 724 IKTEFETILSDDAVLVFPTFPHPAHLHYRVYYKFLNCGYLTMFNALGLPVTACPIEMSKK 545
           ++ + E++L D+ VL+FP+ P  A  H       L+  Y ++FN L +PVT CP+ +  +
Sbjct: 450 LRLQLESLLGDNGVLLFPSHPRTAMPHGMPVLSPLDFNYTSIFNVLRMPVTQCPLGLDSE 509

Query: 544 GLPVGIQIAANRYKDHLTVAVANEFEKAFGGWA 446
           G+P+GIQIAA    D LT+AVA   E+ FGGW+
Sbjct: 510 GMPLGIQIAAACNNDRLTLAVARALEQKFGGWS 542


>SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 379

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 38/94 (40%), Positives = 57/94 (60%)
 Frame = -3

Query: 730 EDIKTEFETILSDDAVLVFPTFPHPAHLHYRVYYKFLNCGYLTMFNALGLPVTACPIEMS 551
           ++++ E + IL ++ VL+FP+ P  A  H    +   N  Y  +FN L +P T CP  +S
Sbjct: 276 QELRQELQRILGENGVLIFPSHPTLALRHNMPMFYPFNFAYTGIFNVLYMPSTQCPAGLS 335

Query: 550 KKGLPVGIQIAANRYKDHLTVAVANEFEKAFGGW 449
           K GLP+G+Q+ A   +DHLT+AVA   E+  GGW
Sbjct: 336 KSGLPMGVQVVAANGQDHLTLAVAMVIEELVGGW 369


>SB_1176| Best HMM Match : Amidase (HMM E-Value=4.5)
          Length = 160

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
 Frame = -3

Query: 757 YYKNLLTKFEDIKTE----FETILSDDAVLVFPTFPH--PAHLHYRVYYK-FLNCGYLTM 599
           YY    +K ++++ E    ++  LS   VL+ PT P   P      V  K F++  +L +
Sbjct: 45  YYGFFYSKSQNLRRELTRAYDEALSKYHVLIMPTVPKRTPKIPDITVSIKEFVHTAFLQI 104

Query: 598 FNALGLPVTACPIEM----SKKGLPVGIQIAANRYKDHLTVAVANEFEK 464
            N     ++  P       S  GLPVG+ I   R+ D + + VA+ +EK
Sbjct: 105 CNTAPFDLSGHPALSINAGSSHGLPVGMMIVGRRFDDAMVLNVAHAYEK 153


>SB_10485| Best HMM Match : DUF1033 (HMM E-Value=0.19)
          Length = 294

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 634 YYKFLNCGYLTMFNALGLPVTACPIEMSKKGLPVGIQIAANRYKDHLTVAVANEFE 467
           Y +F+  G LT     G+P    P+     GLP+ +Q+ +  +++H  + VA+  E
Sbjct: 188 YTRFMQLGNLT-----GVPCMTLPVGYDGNGLPISLQVMSGWWQEHKMLRVAHACE 238


>SB_3668| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 457

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
 Frame = -3

Query: 715 EFETILSDDAVLVFPTFPHPAHLHYRVYY------KFLNCGYLTMFNALGLPVT 572
           E+ TI +    + FPT P P  +HYR Y       +F+   YL + + L  P T
Sbjct: 278 EYVTIQAVITTMAFPTAPFPPRVHYRYYIFIFLAGEFIARSYLAVISTLVKPET 331


>SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1010

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 23/81 (28%), Positives = 33/81 (40%)
 Frame = +2

Query: 248 CTMY*KPKHYLVKYNYIYFLHDFSVLSYQPFLIFQNDSMVTCDVCLNYTNIILRFTLYCN 427
           CT    P+ +LV ++ +   H   V S+        D    CDVC   + I  RF+ +C 
Sbjct: 125 CTSCFNPQRHLVHHHPLRVAHTDIVYSH-------TDGNWVCDVCRQTSRINERFSHHCE 177

Query: 428 RIFIRSCPATECFLKFISDRH 490
                 C   +CF K I   H
Sbjct: 178 DCEFDVC--RDCFRKHIIPSH 196


>SB_10648| Best HMM Match : 7TM-7TMR_HD (HMM E-Value=3.4)
          Length = 272

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -3

Query: 211 NCLIHIVM-RMSYLKGLVHFSISF*CDLCIGNPLFKYRSVVLL 86
           +C+ HIV+  +SY   +   S+S  C + I +P ++YR+ V+L
Sbjct: 169 SCICHIVIVYLSYRYRVSVISLSCICHIVIVHPSYRYRASVIL 211


>SB_20217| Best HMM Match : Amidase (HMM E-Value=2.3e-21)
          Length = 457

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
 Frame = -3

Query: 757 YYKNLLTKFEDIKTEFETILSDDAVLVFPTFPHPAHL--HYRVYYKFLNCGY------LT 602
           YY         +  +++  L+   VLV PT P  A L        K L   Y        
Sbjct: 345 YYSKAQNLAMKLGRDYDDALTKADVLVMPTNPMKARLLPTKETSVKDLLGKYGGHYINTC 404

Query: 601 MFNALGLPVTACPIEMSKKGLPVGIQIAANRYKDHLTVAVANEFE 467
            F+  G P  +    +S  GLPVG+ I   +Y +   + VA  FE
Sbjct: 405 PFDLTGHPALSINAGLSD-GLPVGLMIVGKKYDEETILRVAYAFE 448


>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 654

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 216 PQLISTV*ILHARCTKNPNIIWSNITIYIFYTIFLCYHINHS 341
           P  I+ + ++H R   +P +  S   I +  TI  C+H  HS
Sbjct: 568 PSCIAIITVIHHRLNHHPALPSSPSFIIVSITILHCHHHRHS 609


>SB_20574| Best HMM Match : Extensin_2 (HMM E-Value=0.25)
          Length = 1508

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 590  IRAASYGLSD*NVEKRPPCRHPNCGKQIQRS 498
            +RAA Y +S  + E RP  RHP  G    RS
Sbjct: 1182 LRAAPYKISSRSPESRPSDRHPRHGYNEPRS 1212


>SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2)
          Length = 1706

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 590 IRAASYGLSD*NVEKRPPCRHPNCGKQIQRS 498
           +RAA Y +S  + E RP  RHP  G    RS
Sbjct: 579 LRAAPYKISSRSPESRPSDRHPRHGYNEPRS 609


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,354,879
Number of Sequences: 59808
Number of extensions: 464614
Number of successful extensions: 800
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -