Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0344
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.55 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   1.3  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    25   2.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   2.2  
EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle...    24   3.9  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   9.0  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   9.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 0.55
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 196 LLCRSPLLTQTPLGSHPPLW*LLTHRLSPHTLPS 297
           +L RSP   + PL S  P   LL+  L P TLP+
Sbjct: 378 VLLRSPTPAKKPLISVAPASKLLSKSLQPSTLPT 411


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
 Frame = -1

Query: 269  CVSSY--HSGGCDPNGVCVRSGDRHSSFYYSSAHQWGADDTMAPRCGDGRCNRHT 111
            C + Y  HS G DP G    SG     F   S HQ        P  G   C+  T
Sbjct: 1256 CSNHYGDHSSGKDPTGAGSSSGKGGGFFDRKSNHQQQQQQQQVPGSGT-ECSAST 1309


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
 Frame = -3

Query: 354 WFTSRGHRRVQPR------WERVQPRWERVRRQSVREQLPQRGMR 238
           W T + H + QP       W R +  W+R+ R   R  +    +R
Sbjct: 202 WSTLKRHVKNQPARSADDLWTRCEAMWKRIDRSECRNLIGDMALR 246


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = -1

Query: 269 CVSSYHSGGCDPNGVCVRSGDRHSSFYYSSAHQWG 165
           C +S  +G CD   +C++   ++ ++ Y+S   +G
Sbjct: 339 CGNSSGAGQCDEGYICLQGYGKNPNYGYTSFDTFG 373


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 345 SRGHRRVQPRWERVQPRWE 289
           S  HRR +PRW R   RW+
Sbjct: 235 SPAHRR-KPRWRRAGRRWK 252


>EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle
           protein protein.
          Length = 178

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 99  PGPYGVPIAAPIAAPWGHGIV 161
           P  Y  P+AAP+AA  G  +V
Sbjct: 147 PLAYKTPLAAPVAAVHGGSVV 167


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 274 LSPHTLPSWLHTLPSWLH 327
           L  +  P WL TL  WL+
Sbjct: 673 LDKYFFPKWLQTLVIWLN 690


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 23/95 (24%), Positives = 45/95 (47%)
 Frame = -3

Query: 345 SRGHRRVQPRWERVQPRWERVRRQSVREQLPQRGMRS*RCLRKKWRPAQQFLLLQRSPVG 166
           S+ HR+ Q + ++ Q + ER     +R+Q  Q         +++ R  QQ    Q+   G
Sbjct: 244 SQRHRQPQQQQQQQQQQGERYVPPQLRQQRQQ---------QQRPRQQQQQQQQQQQQQG 294

Query: 165 R*RYHGPKVRRWALQ*AHHMVLEQPRRRPGKRRIQ 61
             RY  P++R+   Q  H    +Q +++  +++ Q
Sbjct: 295 E-RYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQ 328


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,788
Number of Sequences: 2352
Number of extensions: 12830
Number of successful extensions: 82
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)