Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0344
         (557 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.39 
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         23   1.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 322 LHPPMPTAGKPVTIRTTT 375
           LHPP  +   P TI TTT
Sbjct: 94  LHPPASSTSLPATITTTT 111



 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 278  DNRCVSSYHSGGCDPNGV 225
            + + VS    GGC P GV
Sbjct: 961  EGQTVSGGGMGGCQPGGV 978


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 272 RCVSSYHSGGCDPNGVCV 219
           RC++    GG   NGVC+
Sbjct: 84  RCLAQRRKGGSCRNGVCI 101


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 303 QPRWERVRRQSVREQ 259
           + RWE +RRQ+  EQ
Sbjct: 19  EDRWEEIRRQASVEQ 33


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 132 IAAPWGHGIVSAPLVSA 182
           +A P GH   SAPL++A
Sbjct: 513 VAPPSGHHASSAPLLAA 529


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,285
Number of Sequences: 438
Number of extensions: 3319
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)