Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0343
         (806 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   141   8e-36
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    39   6e-05
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    23   2.5  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   5.8  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   5.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  141 bits (341), Expect = 8e-36
 Identities = 72/226 (31%), Positives = 121/226 (53%)
 Frame = +3

Query: 18  VFAAFVLLVTYIYYWSTRKFDYWKRKNVPYAKPVPFFGNYMRYITLQSYIGDVTQKLCQQ 197
           +     +L   +YY+ T  FD+WK + V   KPVPFFG     I ++       + + ++
Sbjct: 7   ILCGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEK 66

Query: 198 FPDRPYFGSFYGTEPALVLQNPEIIKQVFTKDFYYFNSRDNSDYNHKEVVTQNLFFANGD 377
           + + P  G +    P L+L +PE+IK +  +DF  F +R    +   E ++ +L     +
Sbjct: 67  YKNEPMVGLYATRSPFLLLNDPELIKDILIRDFSKFANRGLGVFERTEPLSPHLLNLEVE 126

Query: 378 KWKVVRQNLTPLFSSLKMKNMFYLVEKCNHSLEDMLDKEIKDLQIIEIRSAMIRYTLDSI 557
           +W+ +R  L+P+F+S K+K MFYL+ +C+ +LE  LDK I+  + IE R    R+T D I
Sbjct: 127 RWRPLRSRLSPIFTSGKLKEMFYLIIECSLNLETYLDKLIEKNEPIECRELTARFTTDVI 186

Query: 558 CSSAFGIESNTLREGGENSPFANMGSIVFSSSITRGLKWISRSMWP 695
            S AFGI+ +++    ENS F  MG  VF+ +    ++   +   P
Sbjct: 187 GSCAFGIDMSSMT--NENSEFRRMGREVFAVNFMNVMRMKLKQFMP 230


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 38.7 bits (86), Expect = 6e-05
 Identities = 35/185 (18%), Positives = 76/185 (41%)
 Frame = +3

Query: 36  LLVTYIYYWSTRKFDYWKRKNVPYAKPVPFFGNYMRYITLQSYIGDVTQKLCQQFPDRPY 215
           L++ +IY+  +R+      + +P    +P  GN +        +     K  + F D   
Sbjct: 23  LILYFIYFRISRRHLLELAEKIPGPPALPLIGNALDLFGSPDAMFSQVLKKAENFKD--V 80

Query: 216 FGSFYGTEPALVLQNPEIIKQVFTKDFYYFNSRDNSDYNHKEVVTQNLFFANGDKWKVVR 395
              + G +  + L +P  ++ + + + Y   S +   +  K  +   L  + G KW+  R
Sbjct: 81  VKIWVGPKLVICLIDPRDVEIILSSNVYIDKSTEYRFF--KPWLGDGLLISTGQKWRNHR 138

Query: 396 QNLTPLFSSLKMKNMFYLVEKCNHSLEDMLDKEIKDLQIIEIRSAMIRYTLDSICSSAFG 575
           + + P F    +K+   L      S+ + + KE  + +  +  + M   T+D +  +A G
Sbjct: 139 KLIAPTFHLNVLKSFIDLFNANARSVVEKMRKE--NGKEFDCHNYMSELTVDILLETAMG 196

Query: 576 IESNT 590
           +   T
Sbjct: 197 VSKPT 201


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +3

Query: 255 QNPEIIKQVFTKDFYYFNSRDNSDYNHKEVVTQNL 359
           + P+II  +  K  +  N+ +N++YN+ + +  N+
Sbjct: 77  REPKIISSLSNKTIHNNNNYNNNNYNNYKKLYYNI 111


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 255 QNPEIIKQVFTKDFYYFNSRDNSDYNH 335
           + P+II  +  K  +  N+ +N++YN+
Sbjct: 77  REPKIISSLSNKTIHNNNNYNNNNYNN 103


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 255 QNPEIIKQVFTKDFYYFNSRDNSDYNH 335
           + P+II  +  K  +  N+ +N++YN+
Sbjct: 310 REPKIISSLSNKTIHNNNNYNNNNYNN 336


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 253  KTRAGSVP*NDPKYGLSGNCWHSFCVTSP 167
            KTRA +    D    L G CWH+   T P
Sbjct: 1448 KTRAQTFDGKDYPLRL-GPCWHAVMTTYP 1475


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,847
Number of Sequences: 438
Number of extensions: 4627
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)