Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0342
         (791 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    42   0.013
UniRef50_A2SS09 Cluster: Putative uncharacterized protein; n=2; ...    36   1.2  
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    34   4.7  
UniRef50_UPI0000D56470 Cluster: PREDICTED: similar to Cytochrome...    33   8.2  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 42.3 bits (95), Expect = 0.013
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -3

Query: 624 AGWWYLPARTHKRSYHK 574
           A WWYLPARTHKRSYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_A2SS09 Cluster: Putative uncharacterized protein; n=2;
           Methanocorpusculum labreanum Z|Rep: Putative
           uncharacterized protein - Methanocorpusculum labreanum
           (strain ATCC 43576 / DSM 4855 / Z)
          Length = 227

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +2

Query: 623 AYFCREAVMRFRFEGWGSRCNYTEILKLISQGGWRIYVVDV 745
           A F + AV+ F   G+G+   + EI ++IS+ GW  Y++ +
Sbjct: 142 ALFAKPAVVNFARNGFGAAFRFGEIFRMISKAGWLKYILSL 182


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 33.9 bits (74), Expect = 4.7
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -3

Query: 789 ELTAHLMLSGYWSP 748
           ELTAHL+LSGYWSP
Sbjct: 162 ELTAHLVLSGYWSP 175


>UniRef50_UPI0000D56470 Cluster: PREDICTED: similar to Cytochrome
           P450 4c3 (CYPIVC3); n=5; Tribolium castaneum|Rep:
           PREDICTED: similar to Cytochrome P450 4c3 (CYPIVC3) -
           Tribolium castaneum
          Length = 495

 Score = 33.1 bits (72), Expect = 8.2
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
 Frame = +3

Query: 453 HPDINKLVTRPLELLFSLVKRE---------NYVSAVSKLNILVFPLIPICGRTSCESAR 605
           +P+I + V   LEL+     RE          Y+  V K  + V P++P+  RT  +  +
Sbjct: 319 YPEIQEKVRSELELILGPDDREITLEDINNLEYLERVIKETLRVLPIVPLITRTVEQDVK 378

Query: 606 VGTTTLP 626
           +GT T+P
Sbjct: 379 LGTKTIP 385


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,084,741
Number of Sequences: 1657284
Number of extensions: 14711172
Number of successful extensions: 32117
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32061
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)