Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0342
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 31 0.94
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 30 2.2
AF099919-2|AAC68794.1| 160|Caenorhabditis elegans Hypothetical ... 29 3.8
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical ... 28 6.7
AC024796-5|AAN60504.1| 353|Caenorhabditis elegans Hypothetical ... 28 6.7
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 28 8.8
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 293 MILTQVMMKAQVTTATTIKCTPLAPTPRPHQVFTSPTTT 177
M + +++ A TT ++K P AP PRP + PTT+
Sbjct: 287 MDVRELLNGAHQTTVESVKKDPPAPQPRPRPIPVPPTTS 325
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 284 TQVMMKAQVTTATTIKCTPLAPTPRPHQVFTSPTT 180
T MK+ TT TTIK TP PT T+PTT
Sbjct: 154 TPSTMKSTPTTPTTIKSTPTTPTTM-KSTPTTPTT 187
>AF099919-2|AAC68794.1| 160|Caenorhabditis elegans Hypothetical
protein F40G9.7 protein.
Length = 160
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -3
Query: 453 DIMLHIDQSPSISYMYIKCYIGKRHFDVNFERHVESDHVVDMMTE 319
D ML +SPSI ++IK Y GK +R D VVD++ E
Sbjct: 38 DGMLQTIKSPSI--VFIKIYFGKNFLFHGCKRDYSLDDVVDIIEE 80
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 257 TTATTIKCTPLAPTPRPHQVFTSPTTT 177
TT TT TP T P T+PTTT
Sbjct: 72 TTTTTTPTTPTTTTTTPTTTTTTPTTT 98
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 257 TTATTIKCTPLAPTPRPHQVFTSPTTT 177
TT TT TP T P T+PTTT
Sbjct: 79 TTPTTTTTTPTTTTTTPTTTTTTPTTT 105
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 257 TTATTIKCTPLAPTPRPHQVFTSPTTT 177
TT TT TP T P T+PTTT
Sbjct: 152 TTPTTTTTTPTTTTTTPTTTTTTPTTT 178
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 257 TTATTIKCTPLAPTPRPHQVFTSPTTT 177
TT TT TP T P T+PTTT
Sbjct: 159 TTPTTTTTTPTTTTTTPTTTTTTPTTT 185
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 257 TTATTIKCTPLAPTPRPHQVFTSPTTT 177
TT TT TP T P T+PTTT
Sbjct: 166 TTPTTTTTTPTTTTTTPTTTTTTPTTT 192
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 257 TTATTIKCTPLAPTPRPHQVFTSPTTT 177
TT TT TP T P T+PTTT
Sbjct: 173 TTPTTTTTTPTTTTTTPTTTTTAPTTT 199
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 257 TTATTIKCTPLAPTPRPHQVFTSPTTT 177
TT TT TP T P T+PTTT
Sbjct: 180 TTPTTTTTTPTTTTTAPTTTTTTPTTT 206
>Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 513 RENYVSAVSKLNILVFPLIPICGRTSCESARV 608
R + +S S+ ++L+ P PICG + CES V
Sbjct: 696 RSSIISDKSQHHLLLIPDGPICGPSRCESRPV 727
>AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 513 RENYVSAVSKLNILVFPLIPICGRTSCESARV 608
R + +S S+ ++L+ P PICG + CES V
Sbjct: 696 RSSIISDKSQHHLLLIPDGPICGPSRCESRPV 727
>AC024796-5|AAN60504.1| 353|Caenorhabditis elegans Hypothetical
protein Y48G1C.10 protein.
Length = 353
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = -3
Query: 138 FRTSIGKKRNPLITLLSVRPSVCLFVFRLNIIRRN*TCF*FYFIKF 1
F +++GK + L++L ++ F+F+ IIRR +CF F++ +
Sbjct: 263 FVSNVGKAFDNLLSLCAIGEGEH-FIFKKKIIRRIFSCFIFHYFPY 307
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 269 KAQVTTATTIKCTPLAPTPRPHQVFTSPTTT 177
K + +T TT TP T P T+PTTT
Sbjct: 82 KPKPSTTTTTTTTPTTTTTTPTTTTTTPTTT 112
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 257 TTATTIKCTPLAPTPRPHQVFTSPTTT 177
TT TT TP T P T+PTTT
Sbjct: 93 TTPTTTTTTPTTTTTTPTTTTTTPTTT 119
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 257 TTATTIKCTPLAPTPRPHQVFTSPTTT 177
TT TT TP T P T+PTTT
Sbjct: 100 TTPTTTTTTPTTTTTTPTTTTTTPTTT 126
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 257 TTATTIKCTPLAPTPRPHQVFTSPTTT 177
TT TT TP T P T+PTTT
Sbjct: 107 TTPTTTTTTPTTTTTTPTTTTTTPTTT 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,535,402
Number of Sequences: 27780
Number of extensions: 366106
Number of successful extensions: 870
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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