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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0342
         (791 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g15120.1 68416.m01913 AAA-type ATPase family protein contains...    31   1.2  
At3g62440.1 68416.m07014 F-box family protein contains F-box dom...    28   6.2  
At3g61160.2 68416.m06845 shaggy-related protein kinase beta / AS...    28   8.2  
At3g61160.1 68416.m06844 shaggy-related protein kinase beta / AS...    28   8.2  
At3g18270.1 68416.m02324 mandelate racemase/muconate lactonizing...    28   8.2  

>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
            PROSITE domains, PS00674: AAA-protein family signature
            and PS00017: ATP/GTP-binding site motif A (P-loop)
          Length = 1954

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +3

Query: 396  NILYTYMICSETGQCVT*CHPDINKLVTRPLELLFSLVKRENYVSAVSKLNI 551
            +++  Y  CS   QCV+     ++KLVTR L L  S +  E    AVS L++
Sbjct: 1787 SLVCLYRCCS---QCVSILQDSMHKLVTRELRLGRSSITTEGIHDAVSSLSV 1835


>At3g62440.1 68416.m07014 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 457

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 429 SPSISYMYIKCYIGKRHFDVNFERHVES 346
           +PS++Y+Y   Y+ K +  VN +  VE+
Sbjct: 244 TPSLAYLYYSDYVPKEYLSVNLDSLVET 271


>At3g61160.2 68416.m06845 shaggy-related protein kinase beta /
           ASK-beta (ASK2) identical to shaggy-related protein
           kinase beta SP:O23145 GI:2569931 from [Arabidopsis
           thaliana]
          Length = 438

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
 Frame = +3

Query: 345 RFQHGVQNLHQNVVFLYNILYTYMICSETG---QCVT*CHPDINKLVTRPLELLFSLVKR 515
           R       ++Q++  +Y  LYTY IC       Q V  CH DI     +P  LL + V  
Sbjct: 193 RASRSYTKMNQHMPLIYIQLYTYQICRAMNYLHQVVGVCHRDI-----KPQNLLVNNVTH 247

Query: 516 ENYVSAVSKLNILV 557
           E  +       +L+
Sbjct: 248 EVKICDFGSAKMLI 261


>At3g61160.1 68416.m06844 shaggy-related protein kinase beta /
           ASK-beta (ASK2) identical to shaggy-related protein
           kinase beta SP:O23145 GI:2569931 from [Arabidopsis
           thaliana]
          Length = 431

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
 Frame = +3

Query: 345 RFQHGVQNLHQNVVFLYNILYTYMICSETG---QCVT*CHPDINKLVTRPLELLFSLVKR 515
           R       ++Q++  +Y  LYTY IC       Q V  CH DI     +P  LL + V  
Sbjct: 186 RASRSYTKMNQHMPLIYIQLYTYQICRAMNYLHQVVGVCHRDI-----KPQNLLVNNVTH 240

Query: 516 ENYVSAVSKLNILV 557
           E  +       +L+
Sbjct: 241 EVKICDFGSAKMLI 254


>At3g18270.1 68416.m02324 mandelate racemase/muconate lactonizing
           enzyme family protein low similarity to cis,cis-muconate
           lactonizing enzyme [Burkholderia sp. TH2] GI:23491535;
           contains Pfam profile: PF01188 Mandelate
           racemase/muconate lactonizing enzyme, C-terminal domain,
           PF02746: Mandelate racemase/muconate lactonizing enzyme,
           N-terminal domain
          Length = 410

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 657 GLKGGAAVVTILRS*NLYLKVGGAFTL*MSMGSSNHLTSG 776
           G+     V+ + RS  + L +GG     ++MG S HL +G
Sbjct: 321 GILESLEVIELARSSGIELMIGGMVETRLAMGFSGHLAAG 360


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,326,750
Number of Sequences: 28952
Number of extensions: 335194
Number of successful extensions: 700
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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