Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0340
         (590 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0505 - 3695937-3695972,3696251-3696316,3696658-3696747,369...    32   0.39 
03_05_0358 - 23438416-23439282,23440116-23440163,23440343-234403...    29   2.1  
10_06_0033 + 9865963-9866090,9868173-9868253,9868358-9868375,986...    29   3.7  
06_03_0080 - 16320459-16320839,16321405-16321524,16321929-163220...    28   4.8  
02_01_0241 + 1595188-1595498,1596621-1596654,1596791-1596979,159...    28   6.4  

>01_01_0505 -
           3695937-3695972,3696251-3696316,3696658-3696747,
           3696934-3697143,3697371-3697404,3697566-3697912
          Length = 260

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +1

Query: 454 CWRSCIH-LHEPWLLAFNFISF 516
           CW+ C+  +H  WLLAF  +SF
Sbjct: 71  CWKPCLEQIHPGWLLAFRVVSF 92


>03_05_0358 -
           23438416-23439282,23440116-23440163,23440343-23440382,
           23440459-23440610
          Length = 368

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 389 SW*SWLLHRSGHIKRLASVIGLVGGLAFISTSHG 490
           SW  W L  +  ++RLA+ +G VGG+A +  S G
Sbjct: 130 SW-LWWLETAADLRRLATAVGDVGGVAAVVGSGG 162


>10_06_0033 +
           9865963-9866090,9868173-9868253,9868358-9868375,
           9869257-9869374,9869724-9869795,9870049-9870066,
           9870231-9870551,9870652-9870760,9871562-9871736,
           9871761-9871828,9873147-9873227,9873541-9873767
          Length = 471

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 588 DARSLNSPHPHGPSAFHRCQLNTSERDKIE 499
           ++  + SP PHGPSA  R   N  ER   E
Sbjct: 241 ESNFIRSPSPHGPSAMTRKGANYVERQNSE 270


>06_03_0080 -
           16320459-16320839,16321405-16321524,16321929-16322072,
           16322493-16322544,16323009-16323100,16323912-16324014,
           16324237-16324300,16324559-16324973
          Length = 456

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -3

Query: 471 NARPPTRPITLASLLMWPLL 412
           N++PP  P+ L ++ +WPL+
Sbjct: 181 NSKPPDAPVLLVNIPLWPLI 200


>02_01_0241 +
           1595188-1595498,1596621-1596654,1596791-1596979,
           1597956-1598045,1598136-1598201,1598680-1598892
          Length = 300

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +1

Query: 457 WRSCIH-LHEPWLLAFNFISF 516
           WR C+  +H  WLL +  ISF
Sbjct: 60  WRPCLRDIHPAWLLGYRLISF 80


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,632,172
Number of Sequences: 37544
Number of extensions: 311554
Number of successful extensions: 783
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)