Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0340
         (590 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL953897-6|CAI15881.1|  827|Homo sapiens chromosome 1 open readi...    31   2.3  
AL953897-7|CAI15882.1|  615|Homo sapiens chromosome 1 open readi...    31   3.0  
AL833926-1|CAD38782.1|  615|Homo sapiens hypothetical protein pr...    31   3.0  

>AL953897-6|CAI15881.1|  827|Homo sapiens chromosome 1 open reading
           frame 167 protein.
          Length = 827

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = -3

Query: 480 VEMNARPPTRPITLASLLMWPLL*RSQLHQLIRWSSSRNRRKTTVPGGQFSRTRRLSLT 304
           +E   R PT P TL   L+W    R Q   L+ W +   + + T    Q +R RR+ L+
Sbjct: 213 LEKVPRAPTLPDTLQGSLLWAAGQRQQGQCLLLWQARAQQFQGTARWYQHTRQRRIFLS 271


>AL953897-7|CAI15882.1|  615|Homo sapiens chromosome 1 open reading
           frame 167 protein.
          Length = 615

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -3

Query: 465 RPPTRPITLASLLMWPLL*RSQLHQLIRWSSSRNRRKTTVPGGQFSRTRRLSLT 304
           R PT P TL   L+W    R Q   L+ W +   + + T    Q +R RR+ L+
Sbjct: 1   RAPTLPDTLQGSLLWAAGQRQQGQCLLLWQARAQQFQGTARWYQHTRQRRIFLS 54


>AL833926-1|CAD38782.1|  615|Homo sapiens hypothetical protein
           protein.
          Length = 615

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -3

Query: 465 RPPTRPITLASLLMWPLL*RSQLHQLIRWSSSRNRRKTTVPGGQFSRTRRLSLT 304
           R PT P TL   L+W    R Q   L+ W +   + + T    Q +R RR+ L+
Sbjct: 1   RAPTLPDTLQGSLLWAAGQRQQGQCLLLWQARAQQFQGTARWYQHTRQRRIFLS 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,751,387
Number of Sequences: 237096
Number of extensions: 1717229
Number of successful extensions: 3939
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3939
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)