Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0339
         (776 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    40   0.092
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   2.0  
UniRef50_P17061 Cluster: Hydroxyneurosporene methyltransferase; ...    35   2.0  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 39.5 bits (88), Expect = 0.092
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +2

Query: 26  R*VDELTAHLVLSGYWSP 79
           R VDELTAHLVLSGYWSP
Sbjct: 158 RWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 211 WYLPVRTHKRSYHQ 252
           WYLP RTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_P17061 Cluster: Hydroxyneurosporene methyltransferase;
           n=7; Rhodobacteraceae|Rep: Hydroxyneurosporene
           methyltransferase - Rhodobacter capsulatus
           (Rhodopseudomonas capsulata)
          Length = 393

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 1   FFFFFFIAQMSGRAHSPPGVKWLLEPIDIYNVNAPSTLR 117
           +F F+ +A  SGR  SP  +K +LE      V+ P TLR
Sbjct: 343 YFAFYTMAMSSGRTRSPEEIKQMLEKAGFTKVSKPRTLR 381


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,231,147
Number of Sequences: 1657284
Number of extensions: 11291023
Number of successful extensions: 21936
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21928
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)