Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0339
         (776 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0122 + 1495426-1495815                                           30   1.8  
03_04_0010 + 16364037-16364046,16364769-16364858,16366018-163661...    29   3.1  

>10_01_0122 + 1495426-1495815
          Length = 129

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 1   FFFFFFIAQMSGRAHSPPGVKWLLEPIDIYNVN 99
           FFFFFF   +SG   +  G +  L+P+ +Y V+
Sbjct: 15  FFFFFFFFFLSGCLRAGAGDRGALDPVLLYGVD 47


>03_04_0010 +
           16364037-16364046,16364769-16364858,16366018-16366151,
           16367092-16367250,16368191-16368292
          Length = 164

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 159 WGSRCSCTEILELISQGGW 103
           W + C C +I EL++ GGW
Sbjct: 128 WRTMCGCKDIKELLAVGGW 146


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,754,136
Number of Sequences: 37544
Number of extensions: 292905
Number of successful extensions: 491
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)