Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0339
         (776 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_18091| Best HMM Match : F5_F8_type_C (HMM E-Value=3.8)              30   2.4  
SB_193| Best HMM Match : No HMM Matches (HMM E-Value=.)                29   5.5  
SB_11950| Best HMM Match : Pentaxin (HMM E-Value=0.12)                 29   5.5  
SB_51372| Best HMM Match : Pyr_redox (HMM E-Value=3e-12)               28   9.7  

>SB_18091| Best HMM Match : F5_F8_type_C (HMM E-Value=3.8)
          Length = 113

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 463 QQLLGHRNENNDIKKSEIKP 522
           Q+  G+  +NNDIKKSE+ P
Sbjct: 64  QEFTGNTEDNNDIKKSELNP 83


>SB_193| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1816

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 84  YLQRKCAIHLEI*VLKSQYSYNGCPTLQIETHYCFT 191
           + QR CA+ L+  VL ++ SY+ C   +I  H C T
Sbjct: 234 FTQRHCALQLK--VLGNKISYDNCVCNKIWRHVCVT 267


>SB_11950| Best HMM Match : Pentaxin (HMM E-Value=0.12)
          Length = 494

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 84  YLQRKCAIHLEI*VLKSQYSYNGCPTLQIETHYCFT 191
           + QR CA+ L+  VL ++ SY+ C   +I  H C T
Sbjct: 248 FTQRHCALQLK--VLGNKISYDNCVCNKIWRHVCVT 281


>SB_51372| Best HMM Match : Pyr_redox (HMM E-Value=3e-12)
          Length = 872

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 140 QLQRLPHPSNRNALLLHG 193
           Q+QR P P+ RN++ LHG
Sbjct: 29  QVQRRPEPTPRNSIFLHG 46


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,681,721
Number of Sequences: 59808
Number of extensions: 341798
Number of successful extensions: 645
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)