Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0338
(811 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 46 1e-06
AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse t... 42 2e-05
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 40 1e-04
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 39 2e-04
AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse t... 36 0.001
AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse t... 36 0.001
AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse t... 36 0.001
AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse t... 36 0.001
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 35 0.003
AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse t... 35 0.003
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 31 0.032
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 31 0.042
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 29 0.17
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 29 0.22
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 28 0.30
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 28 0.30
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 27 0.90
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 27 0.90
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 26 1.2
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 24 6.4
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 6.4
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 8.4
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 23 8.4
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 46.0 bits (104), Expect = 1e-06
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +3
Query: 552 KQYGFTRGRSTIDAGVDLIKNISQAWEESHNALGVFCDLSKAFDCVEHNTLVRKLHHYGI 731
KQ+GF GRST + + NI +++E ++ D AFD + H+ L+ KL G
Sbjct: 578 KQHGFMPGRSTSTNLMSFVTNIFRSFEAGTQLDAIYTDFHAAFDSLPHSLLLAKLSKLGF 637
Query: 732 RGVSLELIKSYLFQKNPKV 788
+ + SYL ++ +V
Sbjct: 638 GDGIISWLSSYLSNRSCRV 656
Score = 37.1 bits (82), Expect = 6e-04
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +2
Query: 329 APYLATIFNDCIDCGVFPDLMKYSKIIPLFKSGSTFDHSNLRPIS 463
AP+LA IFN + GVFP L K + P+ K G SN R I+
Sbjct: 506 APHLAKIFNLSLSLGVFPALWKSCWLFPVHKKGCRSIVSNYRGIT 550
>AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse
transcriptase protein.
Length = 131
Score = 41.9 bits (94), Expect = 2e-05
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +3
Query: 552 KQYGFTRGRSTIDAGVDLIKNISQAWEESHNALGVFCDLSKAFDCVEHNTLVRKLHHYGI 731
+Q+GF RS V+ + + A+ ++ DL AFD V H L+ KL G
Sbjct: 34 RQHGFFPRRSVTTNLVEFVSHCHAAFASGAQMDVIYTDLKAAFDRVNHRLLLAKLARLGF 93
Query: 732 RGVSLELIKSYLFQKNPKVDV 794
+E ++SYL + +V V
Sbjct: 94 SASLVEWLESYLTNRRYRVKV 114
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 39.5 bits (88), Expect = 1e-04
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +3
Query: 555 QYGFTRGRSTIDAGVDLIKNISQAWEESHNALGVFCDLSKAFDCVEHNTLVRKLHHYGIR 734
Q+GF +ST V+ + + + ++ DL AFD + H L+ KL GI
Sbjct: 650 QHGFVPKKSTTTNLVEFVTYCTSQIDAGAQVDAIYTDLKAAFDSLPHAILLAKLDKLGIP 709
Query: 735 GVSLELIKSYLFQK 776
++ +KSYL +
Sbjct: 710 SPLVQWLKSYLIHR 723
Score = 36.3 bits (80), Expect = 0.001
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 329 APYLATIFNDCIDCGVFPDLMKYSKIIPLFKSGSTFDHSNLRPIS 463
AP LA +FN + G FP + S ++P++K G D N R I+
Sbjct: 577 APILAKLFNASLANGYFPKAWRKSWMVPIYKKGDRTDAINYRGIT 621
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 38.7 bits (86), Expect = 2e-04
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = +3
Query: 468 LLPTLSKIFEKNIXXXXXXXXXXXXXXXKQYGFTRGRSTIDAGVDLIK--NISQAWEESH 641
+L L K+ E+ I QYGF RGRSTI A L+ S+++ +++
Sbjct: 517 MLDALGKVLERLILNRHLEDPDSPQLSDAQYGFRRGRSTISAIQSLVDAGKASRSFGQTN 576
Query: 642 N-----ALGVFCDLSKAFDCVEHNTLVRKLHHYGIRGVSLELIKSY 764
N + V D+ AF+ ++ L G+ L +++SY
Sbjct: 577 NRDKRCLMVVALDVRNAFNTASWQSIANALREKGVPSGLLRILQSY 622
Score = 28.7 bits (61), Expect = 0.22
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 IFNDCIDCGVFPDLMKYSKIIPLFKSG-STFDHSNLRPI 460
++ DC++ G FP K +++ L K G + + S+ RP+
Sbjct: 477 VYQDCLNTGTFPQQWKRQRLVLLPKPGKAPGESSSYRPL 515
>AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse
transcriptase protein.
Length = 129
Score = 36.3 bits (80), Expect = 0.001
Identities = 28/112 (25%), Positives = 47/112 (41%)
Frame = +3
Query: 471 LPTLSKIFEKNIXXXXXXXXXXXXXXXKQYGFTRGRSTIDAGVDLIKNISQAWEESHNAL 650
LP+ +K++E + Q+GF RS V + N A+
Sbjct: 8 LPSCAKVYEI-VIQNSLMYHCRSYISTHQHGFFPRRSVTTNLVKFVSNCHAAFTSGAQMD 66
Query: 651 GVFCDLSKAFDCVEHNTLVRKLHHYGIRGVSLELIKSYLFQKNPKVDVKGKS 806
V+ L AFD V H L+ KL G+ ++ +SY+ +++ V + G S
Sbjct: 67 AVY--LKAAFDRVNHRLLLAKLARIGLSTPLVKWFRSYISERSYYVQIDGVS 116
>AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 35.9 bits (79), Expect = 0.001
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 555 QYGFTRGRSTIDAGVDLIKNISQAWEESHNALGVFCDLSKAFDCVEHNTLVRKLHHYGIR 734
Q+GF RST + + + ++ + ++ DL AFD + H L+ KL G+
Sbjct: 35 QHGFVPNRSTTTNLMQFVSSCHKSIDARLQVDVIYTDLKAAFDRISHVILLAKLDRLGLP 94
Query: 735 GVSLELIKSYLFQKNPKV 788
+ ++SYL + V
Sbjct: 95 DPLVAWLRSYLMGRTYSV 112
>AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 35.9 bits (79), Expect = 0.001
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 555 QYGFTRGRSTIDAGVDLIKNISQAWEESHNALGVFCDLSKAFDCVEHNTLVRKLHHYGIR 734
Q+GF RST + + + ++ + ++ DL AFD + H L+ KL G+
Sbjct: 35 QHGFVPNRSTTTNLMQFVSSCHKSIDARLQVDVIYTDLKAAFDRISHVILLAKLDRLGLP 94
Query: 735 GVSLELIKSYLFQKNPKV 788
+ ++SYL + V
Sbjct: 95 DPLVAWLRSYLMGRTYSV 112
>AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 35.9 bits (79), Expect = 0.001
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 555 QYGFTRGRSTIDAGVDLIKNISQAWEESHNALGVFCDLSKAFDCVEHNTLVRKLHHYGIR 734
Q+GF RST + + + ++ + ++ DL AFD + H L+ KL G+
Sbjct: 35 QHGFVPNRSTTTNLMQFVSSCHKSIDARLQVDVIYTDLKAAFDRISHVILLAKLDRLGLP 94
Query: 735 GVSLELIKSYLFQKNPKV 788
+ ++SYL + V
Sbjct: 95 DPLVAWLRSYLMGRTYSV 112
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 35.1 bits (77), Expect = 0.003
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +3
Query: 555 QYGFTRGRSTIDAGVDLIKNISQAWEESHNALGVFC-----DLSKAFDCVEHNTLVRKLH 719
QYGF +GR+T DA ++ + +I+ A + FC D+ AF+ + R L
Sbjct: 514 QYGFRKGRATTDA-IEKVLSIASASRARNRGANRFCAVVTLDVKNAFNSASWTAIARSLQ 572
Query: 720 HYGIRGVSLELIKSY 764
I ++I +Y
Sbjct: 573 RINIPKYLYDIIGNY 587
Score = 26.2 bits (55), Expect = 1.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 347 IFNDCIDCGVFPDLMKYSKII 409
++ C+D GVFPD K +++
Sbjct: 443 VYQRCLDTGVFPDNWKKQRLV 463
>AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 34.7 bits (76), Expect = 0.003
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +3
Query: 555 QYGFTRGRSTIDAGVDLIKNISQAWEESHNALGVFCDLSKAFDCVEHNTLVRKLHHYGIR 734
Q+GF +ST V+ + + + ++ DL AFD + H L+ KL+
Sbjct: 35 QHGFVPKKSTTTNLVEFVTYYTSQIDAGAQVDAIYTDLKSAFDSLPHAILLAKLNKVRFP 94
Query: 735 GVSLELIKSYLFQK 776
++ +KSYL +
Sbjct: 95 CSLVQWLKSYLINR 108
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 31.5 bits (68), Expect = 0.032
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Frame = +3
Query: 555 QYGFTRGRSTIDA---GVDLIKNISQAWEESHN----ALGVFCDLSKAFDCVEHNTLVRK 713
QYGF RGRST A VD + +H + V D+ AF+ ++
Sbjct: 541 QYGFRRGRSTFSAIQRVVDAGRRAKSFRRTNHRDKRCLMVVALDICNAFNTASWQSIADA 600
Query: 714 LHHYGIRGVSLELIKSYLFQK 776
L + G+ L +I SY ++
Sbjct: 601 LRNKGVPSALLNIIGSYFEER 621
Score = 29.1 bits (62), Expect = 0.17
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 347 IFNDCIDCGVFPDLMKYSKIIPLFKSGS-TFDHSNLRPISV 466
++ DC+ G FP K +++ L K+G + S+ RP+S+
Sbjct: 469 MYQDCLTRGTFPSEWKRQRLVLLSKTGKPPGESSSYRPLSM 509
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 31.1 bits (67), Expect = 0.042
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 344 TIFNDCIDCGVFPDLMKYSKIIPLFKSGS-TFDHSNLRPISV 466
++F +C D G FP K K++ L K G D S LRP+++
Sbjct: 434 SVFQNCFDTGFFPIPWKRQKLVLLPKPGKPPDDASALRPLAL 475
Score = 24.6 bits (51), Expect = 3.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +3
Query: 552 KQYGFTRGRSTIDAGVDLIKNISQAWEESHN----ALGVFCDLSKAFDCVEHNTLVRKLH 719
+Q+GF +GRST +A ++K A + V D+ AF+ + L
Sbjct: 504 RQFGFRKGRSTGEAIAAVLKKRRSALLKKRTGNRYCAIVTIDVKNAFNSANWEAIHAALS 563
Query: 720 HYGIRGVSLELIKSYL 767
I L++SYL
Sbjct: 564 KMMIPPYLCRLLRSYL 579
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 29.1 bits (62), Expect = 0.17
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 IFNDCIDCGVFPDLMKYSKIIPLFKSG-STFDHSNLRPI 460
+F +C+D FP K +++ L K G S + S+ RPI
Sbjct: 464 VFQECLDMSCFPQPWKKQRLVLLPKPGKSPGEPSSFRPI 502
Score = 24.6 bits (51), Expect = 3.7
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 552 KQYGFTRGRSTIDA 593
+Q+GF RGRST+ A
Sbjct: 535 QQFGFRRGRSTLQA 548
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 28.7 bits (61), Expect = 0.22
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 468 LLPTLSKIFEKNIXXXXXXXXXXXXXXXK-QYGFTRGRSTIDAGVDLIKN 614
LL L KI E+ I QYGF +GRST+DA ++ N
Sbjct: 495 LLSVLGKILERLIQRRLTTHLESTGGLSDPQYGFRKGRSTVDAITRVMNN 544
Score = 27.5 bits (58), Expect = 0.52
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 341 ATIFNDCIDCGVFPDLMKYSKIIPLFKSGS-TFDHSNLRPI 460
A + ++ G FPD K +++ L KSG + S+ RPI
Sbjct: 453 AKSYKQLLEAGTFPDAWKRQQLVLLTKSGKPPGEPSSYRPI 493
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 28.3 bits (60), Expect = 0.30
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Frame = +3
Query: 552 KQYGFTRGRST-------IDAGVDLIKNISQAWEESHNALGVFCDLSKAFDCVEHNTLVR 710
+Q+GF RGRST I+AG ++ ++ L V D+ AF+ +
Sbjct: 593 RQHGFRRGRSTIGAIRTVIEAGQSAMRFRRTNGRDNRFLLVVSMDVKNAFNTASWQAIAT 652
Query: 711 KLHHYGIRGVSLELIKSY 764
L G+ +++SY
Sbjct: 653 ALQMKGVPAGLQRIVRSY 670
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 28.3 bits (60), Expect = 0.30
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 IFNDCIDCGVFPDLMKYSKIIPLFKSGS-TFDHSNLRPI 460
++ +C+D FP+ K +++ L K G D S+ RPI
Sbjct: 459 VYQECLDRSCFPEQWKKQRLVLLPKPGKPPGDPSSFRPI 497
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 26.6 bits (56), Expect = 0.90
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +3
Query: 552 KQYGFTRGRST-------IDAGVDLIKNISQAWEESHNALGVFCDLSKAFDCVEHNTLVR 710
+Q+GF RGRST ++AG + ++ L V D+ AF+ ++
Sbjct: 586 RQFGFRRGRSTVSAIQRVVEAGRTAMSFRRTNGRDNRFLLVVALDVKNAFNTANWQSIAS 645
Query: 711 KLHHYGIRGVSLELIKSY 764
+L G+ +++SY
Sbjct: 646 RLQAKGVPVGLQRMLRSY 663
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 26.6 bits (56), Expect = 0.90
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3
Query: 555 QYGFTRGRSTIDA 593
QYGF RGRSTI A
Sbjct: 602 QYGFRRGRSTISA 614
Score = 26.2 bits (55), Expect = 1.2
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 IFNDCIDCGVFPDLMKYSKIIPLFKSGS-TFDHSNLRPI 460
++ DC+ G FP K +++ L K G + S+ RP+
Sbjct: 530 LYQDCLSRGTFPPQWKRQRLVLLPKPGKPPGESSSYRPL 568
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 26.2 bits (55), Expect = 1.2
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 555 QYGFTRGRSTIDA 593
QYGF RGRST+ A
Sbjct: 533 QYGFRRGRSTVQA 545
Score = 25.0 bits (52), Expect = 2.8
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 218 NIGIKDIIGYFKLINIKKTGDLWGLXXXXXXXXXXXXAPYLATIFNDCIDCGVFPDLMKY 397
++ ++++ +N +K L G+ +F +C+D FPD K
Sbjct: 418 DVNEQELLDIASSLNPRKAPGLDGVPNAALTAAIRKHTDIFKKLFQECLDNERFPDEWKK 477
Query: 398 SKIIPLFKSGSTFD-HSNLRPI 460
K+ + K G S+ RPI
Sbjct: 478 QKLALIPKPGKPPGLASSFRPI 499
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 23.8 bits (49), Expect = 6.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 332 PYLATIFNDCIDCGVFPDLMKYSKIIPLF 418
PYLA + + + +F L++Y K PLF
Sbjct: 270 PYLAIVCMNLVVPQLFNYLVQYEKYSPLF 298
Score = 23.8 bits (49), Expect = 6.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 487 KFLKKIFWYF*TISIPITCFI 549
+F + + +YF T S I CF+
Sbjct: 551 QFFQNVIFYFGTASFAIPCFV 571
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.8 bits (49), Expect = 6.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 663 DLSKAFDCVEHNTLVRKLHHYGIRGVSLELIKSYLFQKNPKVDVKG 800
DLS+AFD V+ L + G + L++ + Q + ++ V G
Sbjct: 590 DLSQAFDRVDRGFLFNNMVSMGFNPGLVGLLRRFGDQSSSRILVNG 635
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 8.4
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 555 QYGFTRGRSTI 587
QYGF RG+ST+
Sbjct: 547 QYGFRRGKSTV 557
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 23.4 bits (48), Expect = 8.4
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 552 KQYGFTRGRSTIDA 593
+Q+GF + RST+DA
Sbjct: 565 RQFGFRKKRSTVDA 578
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,692
Number of Sequences: 2352
Number of extensions: 15775
Number of successful extensions: 61
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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