Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0338
         (811 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens ...    37   0.075
AK127847-1|BAC87159.1|  129|Homo sapiens protein ( Homo sapiens ...    34   0.53 
AK127765-1|BAC87120.1|  184|Homo sapiens protein ( Homo sapiens ...    31   6.5  
AK126793-1|BAC86696.1|  188|Homo sapiens protein ( Homo sapiens ...    31   6.5  

>AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45551 fis, clone BRTHA2037247. ).
          Length = 238

 Score = 37.1 bits (82), Expect = 0.075
 Identities = 17/80 (21%), Positives = 45/80 (56%)
 Frame = +3

Query: 570 RGRSTIDAGVDLIKNISQAWEESHNALGVFCDLSKAFDCVEHNTLVRKLHHYGIRGVSLE 749
           +G   I   +++  +I++  +++H  + +  D  KAF+ ++H  +++ L+  GI G  L+
Sbjct: 2   QGWFNICRSINVTHHINRTKDKNHMIISI--DAEKAFNKIQHRFMLKTLNKLGIEGPCLK 59

Query: 750 LIKSYLFQKNPKVDVKGKSL 809
           +I++   ++   + + G+ L
Sbjct: 60  IIRAICDKRTANIILNGQQL 79


>AK127847-1|BAC87159.1|  129|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45950 fis, clone PLACE7008136. ).
          Length = 129

 Score = 34.3 bits (75), Expect = 0.53
 Identities = 17/69 (24%), Positives = 36/69 (52%)
 Frame = +3

Query: 603 LIKNISQAWEESHNALGVFCDLSKAFDCVEHNTLVRKLHHYGIRGVSLELIKSYLFQKNP 782
           ++ +IS+    +H  + +  D  K FD ++H  +++ L   GI G  L++IK+   +   
Sbjct: 22  VVHHISRMKNGNHMIISI--DARKGFDKIQHPFMMKTLSKIGIEGTYLKVIKAIYHKSTA 79

Query: 783 KVDVKGKSL 809
            + + G+ L
Sbjct: 80  NIILNGEML 88


>AK127765-1|BAC87120.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45866 fis, clone OCBBF3001616. ).
          Length = 184

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/80 (20%), Positives = 41/80 (51%)
 Frame = +3

Query: 570 RGRSTIDAGVDLIKNISQAWEESHNALGVFCDLSKAFDCVEHNTLVRKLHHYGIRGVSLE 749
           +G   I   +++I +I++   ++   + +  D  KAF+ ++H  +++ +    I+G  L 
Sbjct: 17  QGWLIICKSINVIHHINRIKNKNQTIISI--DAEKAFEEIQHRFMIKTVSKISIQGTYLN 74

Query: 750 LIKSYLFQKNPKVDVKGKSL 809
           +IK+   +    + + G+ L
Sbjct: 75  VIKAIYDKPTANMILNGEKL 94


>AK126793-1|BAC86696.1|  188|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44843 fis, clone BRACE3050270. ).
          Length = 188

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +3

Query: 663 DLSKAFDCVEHNTLVRKLHHYGIRGVSLELIKSYLFQKNPKVDVKGKSL 809
           D  KAFD ++H+ +++ L   GI G  L+++++   +    + + G  L
Sbjct: 11  DAEKAFDEIQHHFMLKILDKLGIDGTYLKIVRAIYDKPTANIILNGHKL 59


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,324,004
Number of Sequences: 237096
Number of extensions: 2115330
Number of successful extensions: 2791
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2791
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)