Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0338
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 45 6e-05
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 45 6e-05
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 32 0.56
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 31 0.74
U13875-2|AAA21165.2| 214|Caenorhabditis elegans Temporarily ass... 29 3.0
Z50006-3|CAA90299.1| 334|Caenorhabditis elegans Hypothetical pr... 28 6.9
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 28 6.9
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 28 6.9
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 28 6.9
U58756-6|AAY44007.1| 286|Caenorhabditis elegans Hypothetical pr... 28 9.1
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/97 (32%), Positives = 42/97 (43%)
Frame = +3
Query: 468 LLPTLSKIFEKNIXXXXXXXXXXXXXXXKQYGFTRGRSTIDAGVDLIKNISQAWEESHNA 647
LLP L K+F K + +Q GF R STID L + + E
Sbjct: 457 LLPVLYKVFTKCLLNRMRRSLDEAQPV-EQAGFRRSFSTIDHIHSLQRLLEVGREYQIPL 515
Query: 648 LGVFCDLSKAFDCVEHNTLVRKLHHYGIRGVSLELIK 758
VF D KAFD VEH + + L G G ++L+K
Sbjct: 516 TLVFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDLLK 552
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/97 (32%), Positives = 42/97 (43%)
Frame = +3
Query: 468 LLPTLSKIFEKNIXXXXXXXXXXXXXXXKQYGFTRGRSTIDAGVDLIKNISQAWEESHNA 647
LLP L K+F K + +Q GF R STID L + + E
Sbjct: 628 LLPVLYKVFTKCLLNRMRRSLDEAQPV-EQAGFRRSFSTIDHIHSLQRLLEVGREYQIPL 686
Query: 648 LGVFCDLSKAFDCVEHNTLVRKLHHYGIRGVSLELIK 758
VF D KAFD VEH + + L G G ++L+K
Sbjct: 687 TLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLK 723
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/97 (32%), Positives = 42/97 (43%)
Frame = +3
Query: 468 LLPTLSKIFEKNIXXXXXXXXXXXXXXXKQYGFTRGRSTIDAGVDLIKNISQAWEESHNA 647
LLP L K+F K + +Q GF R STID L + + E
Sbjct: 367 LLPVLYKVFTKCLLNRMRRSLDEAQPV-EQAGFRRSFSTIDHIHSLQRLLEVGREYQIPL 425
Query: 648 LGVFCDLSKAFDCVEHNTLVRKLHHYGIRGVSLELIK 758
VF D KAFD VEH + + L G G ++L+K
Sbjct: 426 TLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLK 462
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 654 VFCDLSKAFDCVEHNTLVRKLHHYGIRGVSLELIK 758
VF D KAFD VEH + + L G ++L+K
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLK 74
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 672 KAFDCVEHNTLVRKLHHYGIRGVSLELIKSYLFQKNPKVDV 794
KAFD V H+ L++KLH +GI + +L + V V
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKV 42
>U13875-2|AAA21165.2| 214|Caenorhabditis elegans Temporarily
assigned gene nameprotein 339 protein.
Length = 214
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 561 GFTRGRSTIDAGVDLIKNISQAW--EESHNALGVFCDLS 671
GF +GR T D+G + N + W +++ NALG +LS
Sbjct: 9 GFKQGRGTGDSGQSSLYNNERRWKDDDTFNALGATDELS 47
>Z50006-3|CAA90299.1| 334|Caenorhabditis elegans Hypothetical
protein T07C5.2 protein.
Length = 334
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 344 TIFNDCIDCGVFPDLMKYSKII 409
T F DC+ CGV L KY K +
Sbjct: 2 TNFGDCVVCGVSTHLFKYGKYL 23
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 152 ISDAESLLQDHVDKCSVNFKCTNIGIKDIIGYFKLINIKKTGD 280
++ A SLL H+D+C + GI ++I F + +I D
Sbjct: 540 MNQATSLLNAHLDECGPKIRHFKEGIYNVIREFNIADIASQND 582
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 152 ISDAESLLQDHVDKCSVNFKCTNIGIKDIIGYFKLINIKKTGD 280
++ A SLL H+D+C + GI ++I F + +I D
Sbjct: 540 MNQATSLLNAHLDECGPKIRHFKEGIYNVIREFNIADIASQND 582
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 152 ISDAESLLQDHVDKCSVNFKCTNIGIKDIIGYFKLINIKKTGD 280
++ A SLL H+D+C + GI ++I F + +I D
Sbjct: 540 MNQATSLLNAHLDECGPKIRHFKEGIYNVIREFNIADIASQND 582
>U58756-6|AAY44007.1| 286|Caenorhabditis elegans Hypothetical
protein F58F9.9 protein.
Length = 286
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 332 PYLATIFNDCIDCGVFP-DLMKYSKIIPLFKSGSTFDHSNLRPISVPTTYI 481
PY+ I N CG FP D + S+ K G D S +P S T Y+
Sbjct: 94 PYVPMIINGTSQCGPFPKDTGRSSEAPCCPKDGFWSDWSAYKPNSNNTAYV 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,262,343
Number of Sequences: 27780
Number of extensions: 348421
Number of successful extensions: 735
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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