Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0338
         (811 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   7.7  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 242 GYFKLINIKKTGDLWGL 292
           G FKL++ K    LWGL
Sbjct: 486 GVFKLVDSKAVSRLWGL 502


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 117 QQSSAQRHWPLLDE 76
           QQ   Q+HWP+ +E
Sbjct: 456 QQQQQQQHWPMEEE 469


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 107 LLC*YPSFYYKIFNFISDAESLLQDHVDKC 196
           L+  YP++ Y    +     S+ +  VDKC
Sbjct: 102 LIAPYPNWSYNDVKYCDGLTSVYRMQVDKC 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,231
Number of Sequences: 438
Number of extensions: 4934
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)