Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0336
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   2.6  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    23   2.6  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.6  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   4.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   4.5  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   4.5  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   6.0  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   6.0  

>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 127 GKYLLIRERSVMQPHSMML*MCKKYHLCYKIMV 225
           G+ LL+ +   ++P +++   CK YH+  K ++
Sbjct: 35  GEDLLVNDFFKVKPSALVSVKCKPYHVGSKFLL 67


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 127 GKYLLIRERSVMQPHSMML*MCKKYHLCYKIMV 225
           G+ LL+ +   ++P +++   CK YH+  K ++
Sbjct: 50  GEDLLVNDFFKVKPSALVSVKCKPYHVGSKFLL 82


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 127 GKYLLIRERSVMQPHSMML*MCKKYHLCYKIMV 225
           G+ LL+ +   ++P +++   CK YH+  K ++
Sbjct: 268 GEDLLVNDFFKVKPSALVSVKCKPYHVGSKFLL 300


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 127 GKYLLIRERSVMQPHSMML*MCKKYHLCYKIMV 225
           G+ LL+ +   ++P +++   CK YH+  K ++
Sbjct: 268 GEDLLVNDFFKVKPSALVSVKCKPYHVGSKFLL 300


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +1

Query: 385 SLWKVGQEMVDYVLVKWNVIVRLHTE-LPNFYVNVYLK 495
           S W    + V+Y L+ W   + + T+ L +F +   LK
Sbjct: 151 STWSKKSKQVEYFLIHWYPRMLISTKLLAHFLILTVLK 188


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +1

Query: 385 SLWKVGQEMVDYVLVKWNVIVRLHTE-LPNFYVNVYLK 495
           S W    + V+Y L+ W   + + T+ L +F +   LK
Sbjct: 151 STWSKKSKQVEYFLIHWYPRMLISTKLLAHFLILTVLK 188


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 441 HVPFHQNVIHHLLPYLP 391
           H P HQ VI+H  P  P
Sbjct: 43  HHPIHQTVIYHNNPRDP 59


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 194 KNIISVTRLWLPSTW**SHVQW 259
           KN + +T +WL   W   +++W
Sbjct: 46  KNQLLITNIWLSLEWNDYNLKW 67


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 194 KNIISVTRLWLPSTW**SHVQW 259
           KN + +T +WL   W   +++W
Sbjct: 46  KNQLLITNIWLSLEWNDYNLKW 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,424
Number of Sequences: 336
Number of extensions: 4532
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)