Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0336
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0487 + 24838620-24838967,24840526-24840747,24840819-248411... 369 e-102
04_04_1323 + 32644956-32645096,32645488-32646126,32646701-326469... 200 7e-52
08_01_0475 - 4185534-4186047,4187437-4187708,4188032-4188979,419... 197 9e-51
03_04_0004 + 16234648-16234731,16235178-16235237,16235598-162356... 195 3e-50
10_08_0498 - 18342517-18342960,18343164-18343397,18343569-183437... 187 9e-48
06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,376... 29 3.9
06_01_1108 - 9125440-9125845,9125850-9126244 28 6.9
01_01_0900 + 7091970-7092068,7092175-7093131,7093210-7093968,709... 28 9.1
>03_05_0487 + 24838620-24838967,24840526-24840747,24840819-24841109,
24841316-24841513,24841641-24841705,24841788-24841874,
24841988-24842108,24842200-24842244,24842321-24842458,
24842571-24842643,24842723-24842799,24842882-24842989,
24843108-24843224,24843524-24843679,24843780-24843881,
24844036-24844161,24844237-24844314,24844390-24844485,
24844592-24844707,24844781-24844850,24844930-24844983,
24845062-24845205,24845297-24845596,24845780-24846202,
24846316-24846429
Length = 1222
Score = 369 bits (908), Expect = e-102
Identities = 168/227 (74%), Positives = 190/227 (83%)
Frame = +3
Query: 3 GIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDA 182
G+ Y QEDMP+T EGITPDII+NPHAIPSRMTIG LIECI GKV+++ G+ GDATPF D
Sbjct: 984 GMTYTQEDMPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTD- 1042
Query: 183 VNVQKISSLLQDYGYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARG 362
V V IS L GY +RG E MYNGHTGRK+ A +FLGPTYYQRLKHMVDDKIHSR RG
Sbjct: 1043 VTVDNISKALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRG 1102
Query: 363 PVQILVRQPMEGRARDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLI 542
PVQIL RQP EGR+RDGGLRFGEMERDC IAHGAA FL+ERLF+ SD YR+HVC CGLI
Sbjct: 1103 PVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLI 1162
Query: 543 AIANLRNNTFECKGCKNKTQISQIRLPYAAKLLFQELMSMNIAPRLM 683
AIANL+ N+FEC+GCKNKT I Q+ +PYA KLLFQELM+M IAPR++
Sbjct: 1163 AIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRML 1209
>04_04_1323 + 32644956-32645096,32645488-32646126,32646701-32646907,
32647020-32647100,32647686-32648566,32648641-32648932,
32649657-32650673,32651334-32651605,32651992-32652493
Length = 1343
Score = 200 bits (489), Expect = 7e-52
Identities = 106/232 (45%), Positives = 140/232 (60%), Gaps = 7/232 (3%)
Frame = +3
Query: 3 GIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDA 182
G QE+ PFT +GI PDI+INPHA P+R T G L+E GK + G + ATPF A
Sbjct: 1107 GFLESQENFPFTYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTA 1166
Query: 183 VNVQKISSLLQDYGYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARG 362
+ I+ L G+ G E + NG TG ++++ +F+GPT+YQRL HM +DK+ R G
Sbjct: 1167 -SFDVITDQLHKAGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTG 1225
Query: 363 PVQILVRQPMEGRARDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLI 542
PV L RQP+ R R GG++FGEMERDC +AHGAA L ERLF +SD ++HVC C +
Sbjct: 1226 PVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERV 1285
Query: 543 AIANLRN-------NTFECKGCKNKTQISQIRLPYAAKLLFQELMSMNIAPR 677
A +R C C++ I +I +PY AKLL+QEL SM I R
Sbjct: 1286 ANVIMRPVPGGKKIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLR 1337
>08_01_0475 - 4185534-4186047,4187437-4187708,4188032-4188979,
4190096-4190387,4190486-4191357,4192298-4192354,
4192391-4192504,4192966-4193595
Length = 1232
Score = 197 bits (480), Expect = 9e-51
Identities = 102/228 (44%), Positives = 136/228 (59%), Gaps = 11/228 (4%)
Frame = +3
Query: 18 QEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQK 197
QE+ PFT +GI PDI+INPH P+R T G L+E GK + G ATPF +V+
Sbjct: 997 QENFPFTHQGIVPDIVINPHGFPTRQTPGQLLEAALGKGIALGGATRYATPFTSP-SVEV 1055
Query: 198 ISSLLQDYGYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQIL 377
I+ L G+ G E + NG TG + + VF GPT+YQRL HM +DK+ R GPV L
Sbjct: 1056 ITEQLHKAGFSRWGGESVINGRTGERAASPVFTGPTFYQRLHHMAEDKVKFRNTGPVHPL 1115
Query: 378 VRQPMEGRARDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAI--- 548
RQP+E R R GG++FGEMERDC +AHGAA L ERLF +SD R+HVC C A+
Sbjct: 1116 TRQPVEDRRRYGGVKFGEMERDCLLAHGAAANLHERLFLLSDVSRLHVCRRCQRAAVVVS 1175
Query: 549 --------ANLRNNTFECKGCKNKTQISQIRLPYAAKLLFQELMSMNI 668
+ C+ C++ ++ ++ +PY AK+L+QEL SM I
Sbjct: 1176 PAVAADGGGGRKVRGPYCRFCRSAEEVVRVSVPYGAKILYQELFSMGI 1223
>03_04_0004 + 16234648-16234731,16235178-16235237,16235598-16235627,
16235859-16235909,16235978-16236076,16236410-16236469,
16236534-16236623,16237011-16237112,16237195-16237305,
16237952-16238068,16238153-16238233,16239089-16239169,
16239798-16239875,16239949-16240088,16240205-16240304,
16240836-16240954,16241152-16241287,16241371-16241501,
16242222-16242298,16242451-16242562,16242638-16242693,
16243724-16243839,16245538-16245622,16245703-16245806,
16246469-16246597,16246888-16246938
Length = 799
Score = 195 bits (476), Expect = 3e-50
Identities = 113/266 (42%), Positives = 150/266 (56%), Gaps = 40/266 (15%)
Frame = +3
Query: 3 GIQYRQEDMPFTCEGITPDIIINPHAIP-------------------SRMT--IGHLIEC 119
G +QED PF+ GI PD+I+NPH P SR+ G +IE
Sbjct: 529 GTIVQQEDFPFSERGICPDLIMNPHGFPRCKINLSKRFFQPYINNTSSRVEGYTGKMIEL 588
Query: 120 IQGKVSSNKGEI--GDA--TPFNDAVNVQKISSLLQDYGYHLRGNEVMYN---------- 257
+ GK + G+ G A P +A V+ IS L +G+ G +++Y+
Sbjct: 589 LGGKAGVSCGQFHYGSAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSDRYFKTVPKS 648
Query: 258 -----GHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRARDGGLR 422
G G A VF+GP YYQ+LKHMV DK+H+RA GP +L RQP EGR+RDGGLR
Sbjct: 649 LFCLSGILGHPCQAYVFMGPIYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLR 708
Query: 423 FGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKGCKNKTQ 602
GEMERDC IA+GA+ + ERL SDPY++ VC CGL+ N + C CKN
Sbjct: 709 LGEMERDCLIAYGASMLIFERLLISSDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGEN 768
Query: 603 ISQIRLPYAAKLLFQELMSMNIAPRL 680
++++R+PYA KLLFQEL +MN+ PRL
Sbjct: 769 MAKMRMPYACKLLFQELQAMNVVPRL 794
>10_08_0498 - 18342517-18342960,18343164-18343397,18343569-18343781,
18344095-18344238,18344348-18344470,18345094-18345169,
18345252-18345355,18345745-18345819,18345942-18346106,
18346248-18346346,18346478-18346677,18346767-18346846,
18346922-18347049,18347936-18348048,18348580-18348672,
18349264-18349348,18350116-18350233,18350326-18350399,
18350485-18350537,18350624-18350804,18351219-18351264,
18351355-18351432,18351556-18351626,18351735-18351798,
18352064-18352071
Length = 1022
Score = 187 bits (455), Expect = 9e-48
Identities = 98/242 (40%), Positives = 135/242 (55%), Gaps = 27/242 (11%)
Frame = +3
Query: 24 DMPFTCE-GITPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVN---- 188
DMPF+ G+ PD+IINPHA PSRMTI L+E I K S KG+ DATPF +V
Sbjct: 761 DMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASSVKERSN 820
Query: 189 --VQKISSLLQDYGYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARG 362
V ++ +L YG++ G E++Y+G G ++ ++FLGP YYQRL+HMV DK R G
Sbjct: 821 SIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVRTTG 880
Query: 363 PVQILVRQPMEGRARDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLI 542
+ + RQP+ GR GG+RFGEMERD +AHGA+ L +RL SD + VC+ CG +
Sbjct: 881 RIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSICGSL 940
Query: 543 AIANLRNN--------------------TFECKGCKNKTQISQIRLPYAAKLLFQELMSM 662
A + + F C+ CK + + +PY + L EL +M
Sbjct: 941 LTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAAM 1000
Query: 663 NI 668
NI
Sbjct: 1001 NI 1002
>06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,
3764013-3764961,3766967-3767064,3768144-3768284,
3768758-3768874,3768924-3769013,3769014-3771818
Length = 1632
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 78 AIP-SRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISSLLQDYGYH 230
AIP S T+ + +C S+NK + D T N + + Q++S L QD YH
Sbjct: 1437 AIPESSGTLNNFAKCCGD--SANKNSLLDQTSENVSTDHQEVSMLPQDQHYH 1486
>06_01_1108 - 9125440-9125845,9125850-9126244
Length = 266
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 345 HSRARGPVQILVRQPMEGRARDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRI-HV 521
H R+ G + +R+ +E RAR G R E D ++ V+ P+ + HV
Sbjct: 81 HGRSAGELAAQLREALEPRARPRGRRRLRDEADARMGRVEGVAATTASMAVTPPWPVRHV 140
Query: 522 CNFCGLIAIA 551
+ C A A
Sbjct: 141 PHLCASAAAA 150
>01_01_0900 +
7091970-7092068,7092175-7093131,7093210-7093968,
7094322-7094366
Length = 619
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 45 GITPDIIINPHAIPSRMTIGHLIECIQ 125
GI PDI+ H + + ++GH+ +C++
Sbjct: 361 GIKPDIVTYSHQLNALSSMGHMAKCMK 387
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,624,605
Number of Sequences: 37544
Number of extensions: 414591
Number of successful extensions: 957
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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