Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0335
         (818 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q084T2 Cluster: Polysaccharide biosynthesis protein; n=...    36   0.93 
UniRef50_Q97J01 Cluster: Glycosyltransferase, involved in cell w...    34   3.8  

>UniRef50_Q084T2 Cluster: Polysaccharide biosynthesis protein; n=1;
           Shewanella frigidimarina NCIMB 400|Rep: Polysaccharide
           biosynthesis protein - Shewanella frigidimarina (strain
           NCIMB 400)
          Length = 471

 Score = 36.3 bits (80), Expect = 0.93
 Identities = 23/77 (29%), Positives = 39/77 (50%)
 Frame = +2

Query: 230 TPLSEKKILDRYYQFTINIKELLRSVKLYCYVTTKGNVHIYYQNLNSFFF*VISSITVIF 409
           +PL  K I++     T+     + S+ L+ +V   G  ++  +N N  F   I++ T+IF
Sbjct: 60  SPLVSKDIIEDGEYSTVLWFSAILSIVLFIFVIVIG--YVLLENENDLFLLGIATSTIIF 117

Query: 410 AAKSYPSAARKRRSSNF 460
              S P  A+ RR +NF
Sbjct: 118 ILISRPFLAKLRRDNNF 134


>UniRef50_Q97J01 Cluster: Glycosyltransferase, involved in cell wall
           biogenesis; n=1; Clostridium acetobutylicum|Rep:
           Glycosyltransferase, involved in cell wall biogenesis -
           Clostridium acetobutylicum
          Length = 768

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 32/95 (33%), Positives = 41/95 (43%)
 Frame = +2

Query: 281 NIKELLRSVKLYCYVTTKGNVHIYYQNLNSFFF*VISSITVIFAAKSYPSAARKRRSSNF 460
           +IKEL  S+K+  Y+T + N H    NLN+      S   V F A   P      ++  F
Sbjct: 148 DIKELCESLKVG-YITREDNTHAKAGNLNNALKQTSSPYVVTFDADMIPMHDFLLKTIPF 206

Query: 461 VFVERHLCRVCVQIKFRRASILNLNLFVIMSRVNN 565
             VE  +  V V   F  A     NLF   SRV N
Sbjct: 207 FMVEDKIGFVQVPQNFYNADPFQYNLF-NESRVPN 240


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,958,346
Number of Sequences: 1657284
Number of extensions: 12594019
Number of successful extensions: 21094
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21092
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 71200899835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)