Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0335
         (818 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   1.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.2  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +2

Query: 362 LNSFFF*VISSITVIFAAKSYPSAARKRRSSNFVFVERHL 481
           +NS F  V+S++T+I ++  +        + NF F+++ L
Sbjct: 22  VNSIFL-VMSAVTIILSSLIFNQEQWSSLNKNFQFIDKKL 60


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 633 LFRDRCPCDIYHLIHRL 583
           LF+D  PCD+Y  IH L
Sbjct: 9   LFKD--PCDVYTAIHPL 23


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 633 LFRDRCPCDIYHLIHRL 583
           LF+D  PCD+Y  IH L
Sbjct: 9   LFKD--PCDVYTAIHPL 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,723
Number of Sequences: 336
Number of extensions: 3638
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)