Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0335
         (818 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    24   1.9  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    24   1.9  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    23   3.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.4  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            23   3.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   5.9  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 474 RSTKTKFDDRLFLAADGYDFAANITVIDDIT*KKKEFK 361
           R   T FDD L  A + +D+    T   D+    + FK
Sbjct: 216 RKKDTTFDDYLDYAINPFDYEKRSTDFQDVESGSESFK 253


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 474 RSTKTKFDDRLFLAADGYDFAANITVIDDIT*KKKEFK 361
           R   T FDD L  A + +D+    T   D+    + FK
Sbjct: 216 RKKDTTFDDYLDYAINPFDYEKRSTDFQDVESGSESFK 253


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 155 ITYTFNLKCPCSRYVL 202
           +T T ++KC C R+V+
Sbjct: 22  VTPTMSIKCNCKRHVI 37


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 485 DRDDALQKRSLTIVFFLQPMDMILP 411
           DR++ALQK  +   F ++ +   +P
Sbjct: 431 DREEALQKAGIVTYFIVRALKPFIP 455


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 503 KFRRASILNLNLFVIMSRVNNCVDKIHNRCIKW*MSH 613
           K RR   LN N  +I +   +   K HN  I W M H
Sbjct: 8   KKRRKKNLNQNQMMIWALDCSIKPKDHNGSIYWSMYH 44


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 39  FLFASLTHCTLPNNFKHD*LIAQYLI 116
           FLF SL +     NF +D  I  YLI
Sbjct: 282 FLFRSLQNSLNGKNFNNDDDIKSYLI 307


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,663
Number of Sequences: 438
Number of extensions: 4081
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)