Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0335
         (818 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g05130.1 68416.m00557 expressed protein ; expression supporte...    28   6.5  
At3g28007.1 68416.m03496 nodulin MtN3 family protein contains Pf...    28   8.6  

>At3g05130.1 68416.m00557 expressed protein ; expression supported
           by MPSS
          Length = 634

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +2

Query: 374 FF*VISSITVIFAAKSYPSAARKR 445
           F+ ++SS+T +FAA S+  AAR R
Sbjct: 611 FWTLVSSVTTVFAAASFAYAARAR 634


>At3g28007.1 68416.m03496 nodulin MtN3 family protein contains Pfam
           PF03083 MtN3/saliva family; similar to LIM7 GI:431154
           (induced in meiotic prophase in lily microsporocytes)
           from [Lilium longiflorum]
          Length = 251

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -2

Query: 691 IYYALYFKLNLIL*TKSQKSIQR*VSVRHLPFDTSIMNFINAVI 560
           I+  ++  L  I        + +  SV+++PF  S+ NF+N V+
Sbjct: 136 IFCVIFVSLMYIAPLTIMSKVIKTKSVKYMPFSLSLANFLNGVV 179


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,052,173
Number of Sequences: 28952
Number of extensions: 275710
Number of successful extensions: 406
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1872844800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)