Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0334
(643 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 95 4e-20
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 94 1e-19
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 81 6e-16
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 69 4e-12
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 64 1e-10
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 58 6e-09
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 54 1e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 53 2e-07
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 50 2e-06
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 49 3e-06
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 49 3e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 4e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 47 1e-05
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 47 1e-05
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 44 8e-05
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 41 0.001
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 40 0.001
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 36 0.028
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 34 0.11
SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19) 33 0.26
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 1.8
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 29 2.4
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 29 3.2
SB_19261| Best HMM Match : Keratin_B2 (HMM E-Value=3) 28 7.4
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 132 bits (320), Expect = 2e-31
Identities = 56/133 (42%), Positives = 86/133 (64%)
Frame = +1
Query: 244 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 423
P+ + +PFNKNFY+ HP + K+S E+++ R + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 424 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR 603
+ ++ + Y +PT IQ Q PIA+SG++++G+A+TGSGKT A++ PA+VHI +QP ++
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586
Query: 604 RGDGPIALVLAPT 642
GDGPI L+ APT
Sbjct: 587 VGDGPIVLICAPT 599
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 95.1 bits (226), Expect = 4e-20
Identities = 45/123 (36%), Positives = 71/123 (57%)
Frame = +1
Query: 274 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 453
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 454 YKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 633
++ PTPIQ Q MSG++++G+A+TGSGKTLAY LP + + + P GD P+AL+L
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALIL 151
Query: 634 APT 642
PT
Sbjct: 152 TPT 154
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Frame = +1
Query: 340 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 519
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 520 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPT 642
GVA+TGSGKT A+ +P +V I P I R + GP AL+LAPT
Sbjct: 143 GVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPT 187
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 81.4 bits (192), Expect = 6e-16
Identities = 47/109 (43%), Positives = 61/109 (55%)
Frame = +1
Query: 316 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 495
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ---- 112
Query: 496 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 642
+ILP IVHIN+QP ++ GDGPI LVL PT
Sbjct: 113 --------------------FILPGIVHINHQPLLQPGDGPIVLVLCPT 141
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/93 (39%), Positives = 51/93 (54%)
Frame = +1
Query: 364 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSG 543
VSG I F E F + + + GY+ PTP+Q PI M+G++L+ AQTGSG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 544 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 642
KT AY+LP + + Q P+AL +APT
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPT 561
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 68.9 bits (161), Expect = 3e-12
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +1
Query: 355 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 534
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ AQT
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 535 GSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPT 642
GSGKT A++LP + + N P A+ +APT
Sbjct: 758 GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPT 797
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/88 (35%), Positives = 51/88 (57%)
Frame = +1
Query: 289 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 468
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 469 PIQAQGWPIAMSGKNLVGVAQTGSGKTL 552
PIQ Q P+ +SG++++ A TGSGK L
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLL 248
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +1
Query: 229 QNMRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFE 405
+ ++ D +V QPF K+FY P + K +P E +E+R + E + V G P++ +
Sbjct: 49 EELQPVDHKTVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWA 108
Query: 406 EANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 534
+ + +K Y++PTPIQAQ P+ MSG++++ + T
Sbjct: 109 QTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMT 151
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +1
Query: 391 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 570
++ F + G+ G+ PT IQ QG P+A+SG++++G A+TGSGKTLA+++P
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 571 IVHINNQPPIRRGDGPIALVLAPT 642
I + Q DG ALV++PT
Sbjct: 109 IETLWRQKWTSM-DGLGALVISPT 131
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +1
Query: 355 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 534
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ AQT
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 180
Query: 535 GSGKT 549
GSGKT
Sbjct: 181 GSGKT 185
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +1
Query: 391 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 570
I FE+ + + + V GYK+PTP+Q PI ++L+ AQTGSGKT A+++P
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPI 933
Query: 571 IVHINNQPP 597
+ I + P
Sbjct: 934 LSRIYMEGP 942
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 54.0 bits (124), Expect = 1e-07
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +1
Query: 355 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 534
EV + G P + F +Y + +G PT +Q WP + G+++ GVA
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIE 233
Query: 535 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVL 633
GSGK LAY+LP I I + +GP+ L+L
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLIL 269
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/70 (35%), Positives = 45/70 (64%)
Frame = +1
Query: 433 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 612
QG+K MG+ T IQ + + G++L+G A+TGSGKTLA+++P +V + + + +
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVP-VVELLYKLQFKTRN 643
Query: 613 GPIALVLAPT 642
G ++++PT
Sbjct: 644 GTGVIIISPT 653
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +1
Query: 433 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 612
+ V +G+ PTPIQA P+A+ GK++ A TG+GKT A++LP + + +P +
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP--TQSP 80
Query: 613 GPIALVLAPT 642
LV+ PT
Sbjct: 81 AIRVLVITPT 90
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +1
Query: 448 MGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 627
MG K+PT IQ P + G++ +G A+TGSGKT A+ LP + + + P G A+
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDP-----YGIFAV 79
Query: 628 VLAPT 642
VL PT
Sbjct: 80 VLTPT 84
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/58 (32%), Positives = 38/58 (65%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 573
FE+ + G+ G+ +P+PIQ + P+A++G++++ A+ G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/58 (32%), Positives = 38/58 (65%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 573
FE+ + G+ G+ +P+PIQ + P+A++G++++ A+ G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +1
Query: 328 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 495
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 496 AMSGKNLVG 522
G G
Sbjct: 197 MAHGPKKSG 205
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 418 PDYVQQGVKTMGYKEPTPIQAQGWPIAMS-GKNLVGVAQTGSGKTLAYILPAIVHI 582
PD + + + G+ +PTPIQ+ P A+ ++++G A+TGSGKTLA+ +P I HI
Sbjct: 139 PD-ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHI 193
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +1
Query: 469 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPT 642
PIQA + G++++G A+TG+GKTL++ LP + + + + +RG P LV+APT
Sbjct: 98 PIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPT 156
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Frame = +1
Query: 352 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK--NL 516
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++ N+
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNM 145
Query: 517 VGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 642
+ +Q+G+GKT A++L + ++ P P + L+PT
Sbjct: 146 IAQSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPT 182
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +1
Query: 418 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 573
P V++ +K MG +P PIQ + P S K+L+ ++TG+GK+L ++LP++
Sbjct: 169 PKLVEK-LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV 219
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Frame = +1
Query: 295 PHPTVLK-RSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 468
P TV K +E N T S + + F D V + + + +PT
Sbjct: 343 PEATVSKGEKEVTIEAVGQNPAFTPDSDMAFRQRVYSFAGLGLRDDVLKALDALNIHQPT 402
Query: 469 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG 609
IQ P + +++ AQTGSGKTLAY+ P +VH + R G
Sbjct: 403 VIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAP-LVHRLREDEERHG 448
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/67 (32%), Positives = 41/67 (61%)
Frame = +1
Query: 442 KTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 621
+T G+++P+ IQ + + G++++ AQ+G+GKT + + + I+ Q +R P
Sbjct: 13 ETEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQ--LRE---PQ 67
Query: 622 ALVLAPT 642
ALVL+PT
Sbjct: 68 ALVLSPT 74
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/50 (30%), Positives = 33/50 (66%)
Frame = +1
Query: 433 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 582
+G+ G+++P+PIQ + P+ G +L+ A++G+GKT + + A+ ++
Sbjct: 26 RGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENV 75
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +1
Query: 490 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 642
P+ M GK++V +A+TGSGKT A+++P + G AL+L+PT
Sbjct: 313 PLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTH---TAKVGIRALILSPT 360
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 35.9 bits (79), Expect = 0.028
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 280 KNFYDPHPTVLKRSPYEVEEYRNNHEV-TVSGVEVHNPIQYFEEANFPDYVQQGVKTMGY 456
K D + LK E +E+ N + TV+ + P+ E P V + + +G+
Sbjct: 467 KELPDENDENLKEFAPEDDEFLKNLSLDTVAQMAAGIPV----ETETPPEVYKALGQLGF 522
Query: 457 KEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 594
Q Q +SG + + V TG+GK+L Y LPA ++ P
Sbjct: 523 SSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRSP 568
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 642
K+++G+A+TGSGKT A+ LP + + + P AL+L PT
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP-----QRLFALILTPT 41
>SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19)
Length = 304
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 451 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 576
GY + P+Q Q ++ K+ + + TG+GKT+ Y +PA++
Sbjct: 136 GYIDFRPMQRQAIDTLLAEKDSLILLPTGAGKTICYAIPALL 177
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 499 MSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPT 642
+S ++++ AQ+G+GKT + + + I+ + G D ALVLAPT
Sbjct: 120 LSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPT 168
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 376 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 489
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 286 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 426
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -1
Query: 178 YCHRCQIEKNYRRICCLL----QIWNHRFHGYYSSYQT*LFF 65
+CHR Q NY C ++ Q+W+H + SS ++ +F+
Sbjct: 178 FCHRQQYRHNYYNSCLVITFFRQMWDHLWANVGSSVESSVFY 219
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 499 MSGKNLVGVAQTGSGKTLAYILPAIV 576
MSG + + + TG GK+L + LPA+V
Sbjct: 102 MSGVDCILIMPTGGGKSLCFQLPAVV 127
>SB_19261| Best HMM Match : Keratin_B2 (HMM E-Value=3)
Length = 333
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +1
Query: 451 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 615
G+ P+ Q S V A T T AY+ P +V PP+R G G
Sbjct: 231 GFSPTGPVNGQPTNSTSSSPFSVTSADTIINPTAAYVRPGMVPREIIPPLRDGSG 285
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 472 IQAQGWPIAMSGKNLVGVAQ-TGSGKTLAYILPAIV 576
+Q + G+ V V+ TGSGK+L Y LPA+V
Sbjct: 22 LQQRACETVSKGRQDVFVSMPTGSGKSLCYQLPAVV 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.134 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,345,549
Number of Sequences: 59808
Number of extensions: 412614
Number of successful extensions: 872
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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