Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0334
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 124 4e-29
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 120 9e-28
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 111 5e-25
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 103 8e-23
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 81 9e-16
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 78 5e-15
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 76 2e-14
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 76 2e-14
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 76 2e-14
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 70 2e-12
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 62 3e-10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 62 3e-10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 62 3e-10
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 60 1e-09
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 60 1e-09
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 58 4e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 58 4e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 58 4e-09
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 58 5e-09
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 55 5e-08
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 55 5e-08
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 54 1e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 51 8e-07
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 48 6e-06
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 48 6e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 48 8e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 46 3e-05
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 45 5e-05
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 45 5e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 44 9e-05
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 44 9e-05
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 41 7e-04
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 41 7e-04
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 41 7e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.002
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 34 0.099
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.23
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.40
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 0.53
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.53
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 31 0.70
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 0.93
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 0.93
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.6
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.7
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.7
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.7
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 28 4.9
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 28 4.9
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 28 6.5
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 28 6.5
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 28 6.5
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 28 6.5
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 28 6.5
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL132902-13|CAL64008.1| 913|Caenorhabditis elegans Hypothetical... 27 8.6
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 27 8.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 124 bits (300), Expect = 4e-29
Identities = 57/136 (41%), Positives = 90/136 (66%)
Frame = +1
Query: 235 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN 414
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 415 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 594
P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 595 PIRRGDGPIALVLAPT 642
+RG+GP LVL PT
Sbjct: 196 HRQRGEGPAVLVLLPT 211
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 120 bits (289), Expect = 9e-28
Identities = 51/132 (38%), Positives = 84/132 (63%)
Frame = +1
Query: 247 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDY 426
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 427 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 606
+ + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 607 GDGPIALVLAPT 642
G+GP+A+++ PT
Sbjct: 336 GEGPVAVIVVPT 347
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 111 bits (266), Expect = 5e-25
Identities = 54/137 (39%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Frame = +1
Query: 235 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEA 411
+ + D V + F KNFY + + + EV+ YR + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 412 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 591
+ +K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 592 PPIRRGDGPIALVLAPT 642
P + GDGPIA++LAPT
Sbjct: 370 PELEEGDGPIAVILAPT 386
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 103 bits (248), Expect = 8e-23
Identities = 47/105 (44%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
Frame = +1
Query: 340 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 519
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 520 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPT 642
GVA+TGSGKT A++LP +V I + P + R + GP A+++APT
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPT 387
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 80.6 bits (190), Expect = 9e-16
Identities = 49/140 (35%), Positives = 82/140 (58%), Gaps = 14/140 (10%)
Frame = +1
Query: 265 LQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEANFPD 423
++P ++ Y SP +++E Y N + V S V++ P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 424 YVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ-PP 597
G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSGKTLA++LPA++HI+ Q
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQ 152
Query: 598 IRRGD-----GPIALVLAPT 642
+ D P LVL+PT
Sbjct: 153 YEKNDEEQKPSPFVLVLSPT 172
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 78.2 bits (184), Expect = 5e-15
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Frame = +1
Query: 295 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 471
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 472 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPT 642
IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 76.2 bits (179), Expect = 2e-14
Identities = 46/108 (42%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Frame = +1
Query: 349 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 528
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 529 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPT 642
QTGSGKT A++LP I HI +PP RR P ALVL+PT
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 231
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 76.2 bits (179), Expect = 2e-14
Identities = 46/108 (42%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Frame = +1
Query: 349 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 528
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 529 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPT 642
QTGSGKT A++LP I HI +PP RR P ALVL+PT
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 215
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 76.2 bits (179), Expect = 2e-14
Identities = 46/108 (42%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Frame = +1
Query: 349 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 528
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 529 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPT 642
QTGSGKT A++LP I HI +PP RR P ALVL+PT
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 212
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 69.7 bits (163), Expect = 2e-12
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Frame = +1
Query: 358 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 537
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 538 SGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPT 642
SGKT A+++P + I P R+ P ALVL+PT
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPT 259
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 388 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 567
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 568 AIVHINNQPPIR-RGDG---PIALVLAPT 642
+ + + + G+G P ++L PT
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPT 427
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 388 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 567
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 568 AIVHINNQPPIR-RGDG---PIALVLAPT 642
+ + + + G+G P ++L PT
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPT 427
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 388 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 567
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 568 AIVHINNQPPIR-RGDG---PIALVLAPT 642
+ + + + G+G P ++L PT
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPT 427
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Frame = +1
Query: 388 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 567
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 568 AIVHINNQPPIRRG-DG---PIALVLAPT 642
+ + + + G +G P ++L PT
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPT 384
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Frame = +1
Query: 388 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 567
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 568 AIVHINNQPPIRRG-DG---PIALVLAPT 642
+ + + + G +G P ++L PT
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPT 384
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 58.4 bits (135), Expect = 4e-09
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 579
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 580 INNQPPIR-RGDG---PIALVLAPT 642
+ ++ + G+G P ++L PT
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPT 638
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 58.4 bits (135), Expect = 4e-09
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 579
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 580 INNQPPIR-RGDG---PIALVLAPT 642
+ ++ + G+G P ++L PT
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPT 638
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 58.4 bits (135), Expect = 4e-09
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 579
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 580 INNQPPIR-RGDG---PIALVLAPT 642
+ ++ + G+G P ++L PT
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPT 638
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 579
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 580 INNQPPIRRGDGPIALVLAPT 642
+ +P + LVL PT
Sbjct: 210 MIYRP--KGASCTRVLVLVPT 228
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/87 (31%), Positives = 49/87 (56%)
Frame = +1
Query: 382 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 561
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 562 LPAIVHINNQPPIRRGDGPIALVLAPT 642
+P + + R G AL+++PT
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPT 102
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/87 (31%), Positives = 49/87 (56%)
Frame = +1
Query: 382 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 561
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 562 LPAIVHINNQPPIRRGDGPIALVLAPT 642
+P + + R G AL+++PT
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPT 102
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Frame = +1
Query: 418 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 582
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 583 --NNQPPIRRGDGPIALVLAPT 642
+ + GP AL++APT
Sbjct: 223 DDSQETESTEVRGPRALIVAPT 244
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 579
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 580 INNQPPIRRGDGPIALVLAPT 642
++ P G AL+L PT
Sbjct: 151 LSVDP-----YGIYALILTPT 166
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 579
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 580 INNQPPIRRGDGPIALVLAPT 642
++ P G AL+L PT
Sbjct: 151 LSVDP-----YGIYALILTPT 166
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/92 (30%), Positives = 46/92 (50%)
Frame = +1
Query: 307 VLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 486
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 487 WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 582
P +N++ A TGSGKTLA+ LP I I
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEI 188
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 579
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 580 INNQPPIRRGD-GPIALVLAPT 642
+ + G GP A+++APT
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPT 172
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 579
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 580 INNQPPIRRGDGPIALVLAPT 642
+ + P LVL PT
Sbjct: 106 LLDHP-----QAFFCLVLTPT 121
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +1
Query: 418 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI----- 582
P + +K M PTPIQ + M G ++V A TGSGKTLA+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 583 NNQPPIRRGDGPIALVLAPT 642
++ P L++APT
Sbjct: 804 KDRDVTDEKPSPRLLIVAPT 823
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +1
Query: 418 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI----- 582
P + +K M PTPIQ + M G ++V A TGSGKTLA+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 583 NNQPPIRRGDGPIALVLAPT 642
++ P L++APT
Sbjct: 804 KDRDVTDEKPSPRLLIVAPT 823
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +1
Query: 433 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 573
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +1
Query: 427 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQ 591
+ + +K + Y IQ P + G +++G A+T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 592 PPIRRGDGPIALVLAPT 642
R+ DGP+AL+LAPT
Sbjct: 452 NKARQDDGPLALILAPT 468
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/70 (34%), Positives = 46/70 (65%)
Frame = +1
Query: 433 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 612
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 613 GPIALVLAPT 642
G ++++PT
Sbjct: 140 GTGVIIVSPT 149
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/69 (34%), Positives = 43/69 (62%)
Frame = +1
Query: 436 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 615
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 616 PIALVLAPT 642
A+V+ PT
Sbjct: 114 --AMVIVPT 120
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/84 (26%), Positives = 49/84 (58%)
Frame = +1
Query: 391 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 570
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 571 IVHINNQPPIRRGDGPIALVLAPT 642
+ I+++ P + ALV+APT
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPT 106
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/84 (26%), Positives = 49/84 (58%)
Frame = +1
Query: 391 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 570
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 571 IVHINNQPPIRRGDGPIALVLAPT 642
+ I+++ P + ALV+APT
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPT 106
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 44.0 bits (99), Expect = 9e-05
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Frame = +1
Query: 454 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGD 612
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 613 GPIALVLAPT 642
GP AL++APT
Sbjct: 68 GPRALIVAPT 77
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/86 (25%), Positives = 48/86 (55%)
Frame = +1
Query: 385 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 564
N I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 565 PAIVHINNQPPIRRGDGPIALVLAPT 642
+ ++ Q +R AL+L+PT
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPT 103
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/84 (25%), Positives = 47/84 (55%)
Frame = +1
Query: 391 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 570
I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 571 IVHINNQPPIRRGDGPIALVLAPT 642
+ ++ Q +R AL+L+PT
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPT 103
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 391 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 564
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 565 PAIVHIN 585
+ I+
Sbjct: 268 TMLCRID 274
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 391 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 564
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 565 PAIVHIN 585
+ I+
Sbjct: 293 TMLCRID 299
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 391 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 564
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 565 PAIVHIN 585
+ I+
Sbjct: 677 TMLCRID 683
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/64 (25%), Positives = 39/64 (60%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 579
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 580 INNQ 591
++++
Sbjct: 84 LDSR 87
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/64 (25%), Positives = 39/64 (60%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 579
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 580 INNQ 591
++++
Sbjct: 84 LDSR 87
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +1
Query: 400 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 567
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 34.7 bits (76), Expect = 0.057
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +1
Query: 391 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 570
++ F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 571 IVHINNQPPIRRGDGPIALVLAPT 642
+ I N G AL+L+P+
Sbjct: 68 MRMIQNAKLQPADIG--ALILSPS 89
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 33.9 bits (74), Expect = 0.099
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 496 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 591
A+ GKN V VA TGSGKT I A+ HI +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 490 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 594
P + +++ A TGSGKT+ Y+LP + + ++P
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP 185
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 451 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 594
G+K PIQ Q + + S +N++ A GSGKT L + H N P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTP 1366
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 472 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 573
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 472 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 573
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +1
Query: 433 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHIN 585
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGID 59
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 0.93
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 469 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 576
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 0.93
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 469 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 576
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 15 PASERIHSLNKHLQLNPKNNHVW 83
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 532 TGSGKTLAYILPAIVH 579
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 156 RRIIAEFVASSKFGTTVSTAIIPV 85
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 156 RRIIAEFVASSKFGTTVSTAIIPV 85
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 513 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 334
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 333 D 331
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 513 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 334
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 333 D 331
+
Sbjct: 86 N 86
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 493 IAMSGKNLVGVAQTGSGKTL 552
+A+ GKN + A TGSGKT+
Sbjct: 303 VALQGKNTIVTAPTGSGKTV 322
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 493 IAMSGKNLVGVAQTGSGKTL 552
+A+ GKN + A TGSGKT+
Sbjct: 303 VALQGKNTIVTAPTGSGKTV 322
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = -2
Query: 249 IWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRHDY 70
++ H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 69 FSDLVEDVYLNYGFFLTQ 16
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = -2
Query: 249 IWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRHDY 70
++ H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 69 FSDLVEDVYLNYGFFLTQ 16
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = -2
Query: 249 IWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRHDY 70
++ H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 69 FSDLVEDVYLNYGFFLTQ 16
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = -2
Query: 249 IWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRHDY 70
++ H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 69 FSDLVEDVYLNYGFFLTQ 16
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPT 642
+ L+ A TG GKT A+++PAI + + +P I P L+LA T
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANT 178
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 295 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 453
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 295 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 453
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 250 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPI 393
+ + L+ FN+ Y+ PT L + +E+YR + + G+ NP+
Sbjct: 165 YSNALLKSFNE-IYNDKPTALIENLKTIEKYRKGNVLNQMGLRHRNPL 211
>AL132902-13|CAL64008.1| 913|Caenorhabditis elegans Hypothetical
protein Y71A12B.17 protein.
Length = 913
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 152 LLDLATVAIDLEDLEDLVGKKNSLEVRTCVAQIGILFRSN 271
+L+ AT+ L+ L KNS R C+A I F+ N
Sbjct: 490 VLNFATLETTLKALAHYTNLKNSAATRRCLASIKSQFKKN 529
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 146 IILLDLATVAIDLEDLEDLVGKKNSLEVRTCVA 244
+I+ + ID++DL +V KN + + CVA
Sbjct: 236 LIIASTCWMIIDMDDLSTVVFHKNEITTKRCVA 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.134 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,323,206
Number of Sequences: 27780
Number of extensions: 305709
Number of successful extensions: 820
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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