Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0330
         (618 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0505 - 3695937-3695972,3696251-3696316,3696658-3696747,369...    32   0.42 
03_05_0358 - 23438416-23439282,23440116-23440163,23440343-234403...    29   2.2  
06_03_0080 - 16320459-16320839,16321405-16321524,16321929-163220...    28   5.2  
03_02_0020 - 5045900-5046211,5046233-5046290,5046604-5047242,504...    28   6.8  
02_01_0241 + 1595188-1595498,1596621-1596654,1596791-1596979,159...    28   6.8  
09_04_0074 - 14336430-14338268                                         27   9.0  
04_04_1487 - 33919654-33920399,33920676-33920817                       27   9.0  

>01_01_0505 -
           3695937-3695972,3696251-3696316,3696658-3696747,
           3696934-3697143,3697371-3697404,3697566-3697912
          Length = 260

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +1

Query: 454 CWRSCIH-LHEPWLLAFNFISF 516
           CW+ C+  +H  WLLAF  +SF
Sbjct: 71  CWKPCLEQIHPGWLLAFRVVSF 92


>03_05_0358 -
           23438416-23439282,23440116-23440163,23440343-23440382,
           23440459-23440610
          Length = 368

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 389 SW*SWLLHRSGHIKRLASVIGLVGGLAFISTSHG 490
           SW  W L  +  ++RLA+ +G VGG+A +  S G
Sbjct: 130 SW-LWWLETAADLRRLATAVGDVGGVAAVVGSGG 162


>06_03_0080 -
           16320459-16320839,16321405-16321524,16321929-16322072,
           16322493-16322544,16323009-16323100,16323912-16324014,
           16324237-16324300,16324559-16324973
          Length = 456

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 471 NARPPTRPITLASLLMWPLL 412
           N++PP  P+ L ++ +WPL+
Sbjct: 181 NSKPPDAPVLLVNIPLWPLI 200


>03_02_0020 -
           5045900-5046211,5046233-5046290,5046604-5047242,
           5048475-5048515,5048672-5048728,5048952-5049140
          Length = 431

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 618 GTHPHPTRALDARSLNSPHPHXPSAFHRCQLNTSER 511
           G  P PT+      LNSPH H  S FH  ++ T +R
Sbjct: 367 GPVPLPTKRRVYCVLNSPHVHKDSRFH-FEIRTHQR 401


>02_01_0241 +
           1595188-1595498,1596621-1596654,1596791-1596979,
           1597956-1598045,1598136-1598201,1598680-1598892
          Length = 300

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +1

Query: 457 WRSCIH-LHEPWLLAFNFISF 516
           WR C+  +H  WLL +  ISF
Sbjct: 60  WRPCLRDIHPAWLLGYRLISF 80


>09_04_0074 - 14336430-14338268
          Length = 612

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -1

Query: 615 THPHPTRALDARSLNSPHPHXP 550
           +H H  RAL +R LNS  PH P
Sbjct: 54  SHSHRGRALSSRLLNSLLPHAP 75


>04_04_1487 - 33919654-33920399,33920676-33920817
          Length = 295

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 528 ADTGGRRMDXGGEGSSGTWRLGHVLDVG 611
           AD GG ++  GG+G+ G  R   + D G
Sbjct: 102 ADAGGEKVGEGGDGTIGGGRARELADAG 129


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,365,484
Number of Sequences: 37544
Number of extensions: 301454
Number of successful extensions: 778
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)