Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0328
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   3.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.5  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   4.5  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = -3

Query: 527 EMVQKYQNIFFKNFTQCR**VLKWALS*SDQKYYQI*TKVLF--YYISL---DQETHHNQ 363
           EM++  +++F  +  QC   +++  L      YY++ T + F   +I     D + H N+
Sbjct: 1   EMMEFLKSVFRLDQDQCSHRIVREHLGLKHDNYYELETHIFFDDAFIRTSEDDNDPHVNE 60

Query: 362 Y 360
           Y
Sbjct: 61  Y 61


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = -3

Query: 527 EMVQKYQNIFFKNFTQCR**VLKWALS*SDQKYYQI*TKVLF--YYISL---DQETHHNQ 363
           EM++  +++F  +  QC   +++  L      YY++ T + F   +I     D + H N+
Sbjct: 315 EMMEFLKSVFRLDQDQCSHRIVREHLGLKHDNYYELETHIFFDDAFIRTSEDDNDPHVNE 374

Query: 362 Y 360
           Y
Sbjct: 375 Y 375


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = -3

Query: 527 EMVQKYQNIFFKNFTQCR**VLKWALS*SDQKYYQI*TKVLF--YYISL---DQETHHNQ 363
           EM++  +++F  +  QC   +++  L      YY++ T + F   +I     D + H N+
Sbjct: 548 EMMEFLKSVFRLDQDQCSHRIVREHLGLKHDNYYELETHIFFDDAFIRTSEDDNDPHVNE 607

Query: 362 Y 360
           Y
Sbjct: 608 Y 608


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = -3

Query: 527 EMVQKYQNIFFKNFTQCR**VLKWALS*SDQKYYQI*TKVLF--YYISL---DQETHHNQ 363
           EM++  +++F  +  QC   +++  L      YY++ T + F   +I     D + H N+
Sbjct: 548 EMMEFLKSVFRLDQDQCSHRIVREHLGLKHDNYYELETHIFFDDAFIRTSEDDNDPHVNE 607

Query: 362 Y 360
           Y
Sbjct: 608 Y 608


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 64  LSLVFKVNSALLFLTFPVSLL 2
           L  VF + S L+F  FP+++L
Sbjct: 233 LPCVFFLGSILIFFIFPLAIL 253


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 120 IPASTTKSLISSPTPNH 170
           +P  T     SSPTP+H
Sbjct: 191 LPTPTCSEASSSPTPSH 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,802
Number of Sequences: 336
Number of extensions: 3593
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)