Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0328
         (742 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1466 + 37559600-37559795,37560597-37560730,37561252-375614...    30   1.7  
12_01_1092 - 11362094-11362367,11362739-11362795,11363256-113636...    30   2.2  
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943...    29   3.9  
02_03_0020 - 13996688-13996785,13997168-13997217,13997516-139976...    28   6.8  

>01_06_1466 +
           37559600-37559795,37560597-37560730,37561252-37561437,
           37562538-37562753,37563008-37563119,37563493-37563663,
           37564621-37564684,37565555-37565685,37566263-37566393,
           37566843-37566945,37567322-37567398,37567813-37567860,
           37568162-37568311,37568810-37569010
          Length = 639

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -2

Query: 81  DEKLLFYHWFSKLIQHCCF 25
           +E+L F+ WFS+ ++ CCF
Sbjct: 617 EEQLDFFQWFSQALEKCCF 635


>12_01_1092 -
           11362094-11362367,11362739-11362795,11363256-11363683,
           11364350-11365462
          Length = 623

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 655 VFCDLSKAFDCVEHNTLLRKL 717
           V  D+SKAFDCV H+ +L+ +
Sbjct: 293 VVADVSKAFDCVSHDMVLKMI 313


>06_02_0297 -
           13891954-13892556,13893019-13893855,13894179-13894394,
           13895455-13895874,13896198-13896506
          Length = 794

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 616 ISQAWEESHNALGVFCDLSKAFDCVEHNTLLRKLHHYG 729
           I Q  +     + +  D  KAFD +EH+ +L  + H G
Sbjct: 441 IHQCQQSKREIVLLKLDFEKAFDTIEHSAILSVMQHMG 478


>02_03_0020 -
           13996688-13996785,13997168-13997217,13997516-13997619,
           13997664-13997764,13998436-13998505,13998604-13999422,
           14000894-14001052
          Length = 466

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 119 YPSFYYKIFNFISDAESLLQDHVDKCSVNFKCT 217
           YPSF+ K+F    ++ S + +  +K ++  +CT
Sbjct: 413 YPSFWQKVFKLTGESSSSIHNGGNKKTIKEQCT 445


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,029,417
Number of Sequences: 37544
Number of extensions: 312108
Number of successful extensions: 631
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)