Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0328
(742 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 37 6e-04
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 36 0.001
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 31 0.037
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 30 0.065
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 29 0.15
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 29 0.15
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 28 0.26
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 28 0.35
AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse t... 27 0.61
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 27 0.80
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 26 1.1
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 26 1.1
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 1.9
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 25 2.5
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 24 5.7
AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse t... 23 7.5
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 7.5
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 23 7.5
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 37.1 bits (82), Expect = 6e-04
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +2
Query: 329 APYLATIFNDCIDCGVFPDLMKYSKIIPLFKSGSTFDHSNLRPIS 463
AP+LA IFN + GVFP L K + P+ K G SN R I+
Sbjct: 506 APHLAKIFNLSLSLGVFPALWKSCWLFPVHKKGCRSIVSNYRGIT 550
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 36.3 bits (80), Expect = 0.001
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 329 APYLATIFNDCIDCGVFPDLMKYSKIIPLFKSGSTFDHSNLRPIS 463
AP LA +FN + G FP + S ++P++K G D N R I+
Sbjct: 577 APILAKLFNASLANGYFPKAWRKSWMVPIYKKGDRTDAINYRGIT 621
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 31.1 bits (67), Expect = 0.037
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 344 TIFNDCIDCGVFPDLMKYSKIIPLFKSGS-TFDHSNLRPISV 466
++F +C D G FP K K++ L K G D S LRP+++
Sbjct: 434 SVFQNCFDTGFFPIPWKRQKLVLLPKPGKPPDDASALRPLAL 475
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 30.3 bits (65), Expect = 0.065
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 468 LLPTLSKIFEKNIXXXXXXXXXXXXXXXKQYGFTRGRSTIDA 593
+L L K+ E+ I QYGF RGRSTI A
Sbjct: 517 MLDALGKVLERLILNRHLEDPDSPQLSDAQYGFRRGRSTISA 558
Score = 28.7 bits (61), Expect = 0.20
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 IFNDCIDCGVFPDLMKYSKIIPLFKSG-STFDHSNLRPI 460
++ DC++ G FP K +++ L K G + + S+ RP+
Sbjct: 477 VYQDCLNTGTFPQQWKRQRLVLLPKPGKAPGESSSYRPL 515
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 29.1 bits (62), Expect = 0.15
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 347 IFNDCIDCGVFPDLMKYSKIIPLFKSGS-TFDHSNLRPISV 466
++ DC+ G FP K +++ L K+G + S+ RP+S+
Sbjct: 469 MYQDCLTRGTFPSEWKRQRLVLLSKTGKPPGESSSYRPLSM 509
Score = 25.0 bits (52), Expect = 2.5
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 555 QYGFTRGRSTIDA 593
QYGF RGRST A
Sbjct: 541 QYGFRRGRSTFSA 553
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 29.1 bits (62), Expect = 0.15
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 IFNDCIDCGVFPDLMKYSKIIPLFKSG-STFDHSNLRPI 460
+F +C+D FP K +++ L K G S + S+ RPI
Sbjct: 464 VFQECLDMSCFPQPWKKQRLVLLPKPGKSPGEPSSFRPI 502
Score = 24.6 bits (51), Expect = 3.2
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 552 KQYGFTRGRSTIDA 593
+Q+GF RGRST+ A
Sbjct: 535 QQFGFRRGRSTLQA 548
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 28.3 bits (60), Expect = 0.26
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 IFNDCIDCGVFPDLMKYSKIIPLFKSGS-TFDHSNLRPI 460
++ +C+D FP+ K +++ L K G D S+ RPI
Sbjct: 459 VYQECLDRSCFPEQWKKQRLVLLPKPGKPPGDPSSFRPI 497
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 27.9 bits (59), Expect = 0.35
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 468 LLPTLSKIFEKNIXXXXXXXXXXXXXXXK-QYGFTRGRSTIDA 593
LL L KI E+ I QYGF +GRST+DA
Sbjct: 495 LLSVLGKILERLIQRRLTTHLESTGGLSDPQYGFRKGRSTVDA 537
Score = 27.5 bits (58), Expect = 0.46
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 341 ATIFNDCIDCGVFPDLMKYSKIIPLFKSGS-TFDHSNLRPI 460
A + ++ G FPD K +++ L KSG + S+ RPI
Sbjct: 453 AKSYKQLLEAGTFPDAWKRQQLVLLTKSGKPPGEPSSYRPI 493
>AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse
transcriptase protein.
Length = 131
Score = 27.1 bits (57), Expect = 0.61
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 655 VFCDLSKAFDCVEHNTLLRKLHHYG 729
++ DL AFD V H LL KL G
Sbjct: 68 IYTDLKAAFDRVNHRLLLAKLARLG 92
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 26.6 bits (56), Expect = 0.80
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3
Query: 555 QYGFTRGRSTIDA 593
QYGF RGRSTI A
Sbjct: 602 QYGFRRGRSTISA 614
Score = 26.2 bits (55), Expect = 1.1
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 347 IFNDCIDCGVFPDLMKYSKIIPLFKSGS-TFDHSNLRPI 460
++ DC+ G FP K +++ L K G + S+ RP+
Sbjct: 530 LYQDCLSRGTFPPQWKRQRLVLLPKPGKPPGESSSYRPL 568
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 26.2 bits (55), Expect = 1.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 555 QYGFTRGRSTIDA 593
QYGF RGRST+ A
Sbjct: 533 QYGFRRGRSTVQA 545
Score = 25.0 bits (52), Expect = 2.5
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 218 NIGIKDIIGYFKLINIKKTGDLWGLXXXXXXXXXXXXAPYLATIFNDCIDCGVFPDLMKY 397
++ ++++ +N +K L G+ +F +C+D FPD K
Sbjct: 418 DVNEQELLDIASSLNPRKAPGLDGVPNAALTAAIRKHTDIFKKLFQECLDNERFPDEWKK 477
Query: 398 SKIIPLFKSGSTFD-HSNLRPI 460
K+ + K G S+ RPI
Sbjct: 478 QKLALIPKPGKPPGLASSFRPI 499
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 26.2 bits (55), Expect = 1.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 347 IFNDCIDCGVFPDLMKYSKII 409
++ C+D GVFPD K +++
Sbjct: 443 VYQRCLDTGVFPDNWKKQRLV 463
Score = 24.6 bits (51), Expect = 3.2
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 555 QYGFTRGRSTIDA 593
QYGF +GR+T DA
Sbjct: 514 QYGFRKGRATTDA 526
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 25.4 bits (53), Expect = 1.9
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 552 KQYGFTRGRSTIDA 593
+Q+GF RGRST+ A
Sbjct: 586 RQFGFRRGRSTVSA 599
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 25.0 bits (52), Expect = 2.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 552 KQYGFTRGRSTIDA 593
+Q+GF RGRSTI A
Sbjct: 593 RQHGFRRGRSTIGA 606
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 23.8 bits (49), Expect = 5.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 332 PYLATIFNDCIDCGVFPDLMKYSKIIPLF 418
PYLA + + + +F L++Y K PLF
Sbjct: 270 PYLAIVCMNLVVPQLFNYLVQYEKYSPLF 298
Score = 23.8 bits (49), Expect = 5.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 487 KFLKKIFWYF*TISIPITCFI 549
+F + + +YF T S I CF+
Sbjct: 551 QFFQNVIFYFGTASFAIPCFV 571
>AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse
transcriptase protein.
Length = 129
Score = 23.4 bits (48), Expect = 7.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 667 LSKAFDCVEHNTLLRKLHHYGI 732
L AFD V H LL KL G+
Sbjct: 70 LKAAFDRVNHRLLLAKLARIGL 91
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 7.5
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 555 QYGFTRGRSTI 587
QYGF RG+ST+
Sbjct: 547 QYGFRRGKSTV 557
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 23.4 bits (48), Expect = 7.5
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 552 KQYGFTRGRSTIDA 593
+Q+GF + RST+DA
Sbjct: 565 RQFGFRKKRSTVDA 578
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,795
Number of Sequences: 2352
Number of extensions: 14169
Number of successful extensions: 52
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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