Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0328
(742 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 39 0.006
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 39 0.006
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 37 0.025
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 37 0.033
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 33 0.31
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 33 0.31
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 33 0.31
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 33 0.31
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 33 0.31
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 31 1.2
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 31 1.2
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 31 1.2
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 31 1.2
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 31 1.6
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 31 1.6
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 29 5.0
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 29 6.6
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +2
Query: 134 YKIFNFISDAESLLQDHVDKCSVNFKCTNIGIKDIIGYFKLINIKKTGDLWGLXXXXXXX 313
Y N I + LQ + + + + ++ K ++ +K+ + G+
Sbjct: 432 YSNQNTIDQVKISLQSIAETPNNIAEICRVTYPEVFSIVKALHTRKSPGIDGIPNISLKN 491
Query: 314 XXXXXAPYLATIFNDCIDCGVFPDLMKYSKIIPLFKSGSTFDH-SNLRPISV 466
++ I N C+ G FP K +KI+P+ K G D+ + RPIS+
Sbjct: 492 LPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISL 543
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +2
Query: 134 YKIFNFISDAESLLQDHVDKCSVNFKCTNIGIKDIIGYFKLINIKKTGDLWGLXXXXXXX 313
Y N I + LQ + + + + ++ K ++ +K+ + G+
Sbjct: 380 YSNQNTIDQVKISLQSIAETPNNIAEICRVTYPEVFSIVKALHTRKSPGIDGIPNISLKN 439
Query: 314 XXXXXAPYLATIFNDCIDCGVFPDLMKYSKIIPLFKSGSTFDH-SNLRPISV 466
++ I N C+ G FP K +KI+P+ K G D+ + RPIS+
Sbjct: 440 LPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISL 491
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 37.1 bits (82), Expect = 0.025
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 335 YLATIFNDCIDCGVFPDLMKYSKIIPLFKSGST-FDHSNLRPISV 466
+L IFN +D G FP K + II + K+G T D + RPIS+
Sbjct: 278 FLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPISL 322
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 622 QAWEESHNALGVFCDLSKAFDCVEHNTLLRK 714
+A E A+G F D+ +AFD V H LL K
Sbjct: 374 EAMENKEYAVGAFLDIQQAFDRVWHPGLLYK 404
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 36.7 bits (81), Expect = 0.033
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 335 YLATIFNDCIDCGVFPDLMKYSKIIPLFKSGST-FDHSNLRPISV 466
+LA IFN +D G FP K + II + K+G T D + RP S+
Sbjct: 476 FLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPTSL 520
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 622 QAWEESHNALGVFCDLSKAFDCVEHNTLLRK 714
+A E A+G F D+ +AFD V H LL K
Sbjct: 572 EAMENKEYAVGAFLDIQQAFDRVWHPGLLYK 602
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 33.5 bits (73), Expect = 0.31
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 335 YLATIFNDCIDCGVFPDLMKYSKIIPLFKSG-STFDHSNLRPISV 466
YL I+N + G +PD K++++ + K G S D + RPIS+
Sbjct: 403 YLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 447
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 616 ISQAWEESHNALGVFCDLSKAFDCVEHNTLLRKL 717
I +A+E VF D+S+AFD V H LL KL
Sbjct: 497 ILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 530
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 33.5 bits (73), Expect = 0.31
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 335 YLATIFNDCIDCGVFPDLMKYSKIIPLFKSG-STFDHSNLRPISV 466
YL I+N + G +PD K++++ + K G S D + RPIS+
Sbjct: 519 YLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 616 ISQAWEESHNALGVFCDLSKAFDCVEHNTLLRKL 717
I +A+E VF D+S+AFD V H LL KL
Sbjct: 613 ILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 646
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 33.5 bits (73), Expect = 0.31
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 335 YLATIFNDCIDCGVFPDLMKYSKIIPLFKSG-STFDHSNLRPISV 466
YL I+N + G +PD K++++ + K G S D + RPIS+
Sbjct: 519 YLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 616 ISQAWEESHNALGVFCDLSKAFDCVEHNTLLRKL 717
I +A+E VF D+S+AFD V H LL KL
Sbjct: 613 ILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 646
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 33.5 bits (73), Expect = 0.31
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 335 YLATIFNDCIDCGVFPDLMKYSKIIPLFKSG-STFDHSNLRPISV 466
YL I+N + G +PD K++++ + K G S D + RPIS+
Sbjct: 481 YLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 525
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 616 ISQAWEESHNALGVFCDLSKAFDCVEHNTLLRKL 717
I +A+E VF D+S+AFD V H LL KL
Sbjct: 575 ILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 608
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 33.5 bits (73), Expect = 0.31
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 335 YLATIFNDCIDCGVFPDLMKYSKIIPLFKSG-STFDHSNLRPISV 466
YL I+N + G +PD K++++ + K G S D + RPIS+
Sbjct: 519 YLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 616 ISQAWEESHNALGVFCDLSKAFDCVEHNTLLRKL 717
I +A+E VF D+S+AFD V H LL KL
Sbjct: 613 ILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 646
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 203 NFKCTNIGIKDIIGYFKLINIKKTGDLWGLXXXXXXXXXXXXAPYLATIFNDCIDCGVFP 382
NFK + + ++ G + +KK L YL I+N+ + G FP
Sbjct: 33 NFK--PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFP 90
Query: 383 DLMKYSKIIPLFKSG-STFDHSNLRPISV 466
+ K++ I + K G S F ++ RPIS+
Sbjct: 91 NKWKHASISMIPKPGKSPFALNSYRPISL 119
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 203 NFKCTNIGIKDIIGYFKLINIKKTGDLWGLXXXXXXXXXXXXAPYLATIFNDCIDCGVFP 382
NFK + + ++ G + +KK L YL I+N+ + G FP
Sbjct: 480 NFK--PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFP 537
Query: 383 DLMKYSKIIPLFKSG-STFDHSNLRPISV 466
+ K++ I + K G S F ++ RPIS+
Sbjct: 538 NKWKHASISMIPKPGKSPFALNSYRPISL 566
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 203 NFKCTNIGIKDIIGYFKLINIKKTGDLWGLXXXXXXXXXXXXAPYLATIFNDCIDCGVFP 382
NFK + + ++ G + +KK L YL I+N+ + G FP
Sbjct: 480 NFK--PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFP 537
Query: 383 DLMKYSKIIPLFKSG-STFDHSNLRPISV 466
+ K++ I + K G S F ++ RPIS+
Sbjct: 538 NKWKHASISMIPKPGKSPFALNSYRPISL 566
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.5 bits (68), Expect = 1.2
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 203 NFKCTNIGIKDIIGYFKLINIKKTGDLWGLXXXXXXXXXXXXAPYLATIFNDCIDCGVFP 382
NFK + + ++ G + +KK L YL I+N+ + G FP
Sbjct: 480 NFK--PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFP 537
Query: 383 DLMKYSKIIPLFKSG-STFDHSNLRPISV 466
+ K++ I + K G S F ++ RPIS+
Sbjct: 538 NKWKHASISMIPKPGKSPFALNSYRPISL 566
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 616 ISQAWEESHNALGVFCDLSKAFDCVEHNTLLRKL 717
I +A+E VF D+S+AFD V H LL KL
Sbjct: 613 ILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 646
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 335 YLATIFNDCIDCGVFPDLMKYSKIIPLFKSG-STFDHSNLRPISV 466
YL I+N + G +P+ K++++ + K G S + + RPIS+
Sbjct: 519 YLILIYNSILRLGYYPEAWKHAQVKMILKPGKSANEPRSYRPISL 563
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 616 ISQAWEESHNALGVFCDLSKAFDCVEHNTLLRKL 717
I +A+E VF D+S+AFD V H LL KL
Sbjct: 625 ILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 658
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 335 YLATIFNDCIDCGVFPDLMKYSKIIPLFKSG-STFDHSNLRPISV 466
YL I+N + G +P+ K++++ + K G S+ + + RPIS+
Sbjct: 531 YLILIYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSYRPISL 575
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 335 YLATIFNDCIDCGVFPDLMKYSKIIPLFKSGSTFD-HSNLRPISV 466
Y+ +FN G FP K KII + K G S+ RPIS+
Sbjct: 472 YITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASSYRPISL 516
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 221 IGIKDIIGYFKLINIKKTGDLWGLXXXXXXXXXXXXAPYLATIFNDCIDCGVFPDLMKYS 400
I +++I+ K + +KK+ + + YLA I+N + FP K +
Sbjct: 437 IRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQWKMA 496
Query: 401 KIIPLFKSGSTFDH-SNLRPISV 466
I+ + K G + + RPIS+
Sbjct: 497 AILMIHKPGKPEESPESYRPISL 519
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,725,119
Number of Sequences: 53049
Number of extensions: 571481
Number of successful extensions: 1171
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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