Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0328
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    31   0.65 
U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans...    30   1.5  
AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical ...    30   1.5  
AC087794-3|AAG53700.1|  417|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z50006-3|CAA90299.1|  334|Caenorhabditis elegans Hypothetical pr...    28   6.0  
L19120-1|AAA28155.1|  815|Caenorhabditis elegans kinesin heavy c...    28   6.0  
L07144-3|AAK21446.1|  815|Caenorhabditis elegans Uncoordinated p...    28   6.0  
AB017163-1|BAA32594.1|  815|Caenorhabditis elegans kinesin Heavy...    28   6.0  
U58756-6|AAY44007.1|  286|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +1

Query: 673 KAFDCVEHNTLLRKLHHYGI 732
           KAFD V H+ LL+KLH +GI
Sbjct: 2   KAFDQVNHSLLLQKLHDFGI 21


>U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical
           protein F20B4.7 protein.
          Length = 891

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 655 VFCDLSKAFDCVEHNTLLRKLHHYGIRG 738
           VF D  KAFD VEH  + + L   G  G
Sbjct: 518 VFIDFKKAFDTVEHQAIWKSLDEQGADG 545


>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
           transcriptase protein.
          Length = 1066

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 655 VFCDLSKAFDCVEHNTLLRKLHHYGIRG 738
           VF D  KAFD VEH  + + L   G  G
Sbjct: 689 VFIDFKKAFDSVEHQAIWKSLDEQGADG 716


>AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical
           protein K10F12.5 protein.
          Length = 805

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 655 VFCDLSKAFDCVEHNTLLRKLHHYGIRG 738
           VF D  KAFD VEH  + + L   G  G
Sbjct: 428 VFIDFKKAFDSVEHQAIWKSLDEQGADG 455


>AC087794-3|AAG53700.1|  417|Caenorhabditis elegans Hypothetical
           protein Y32G9A.9 protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 655 VFCDLSKAFDCVEHNTLLRKLHHYG 729
           VF D  KAFD VEH  + + L   G
Sbjct: 40  VFIDFKKAFDSVEHQAIWKSLDEQG 64


>Z50006-3|CAA90299.1|  334|Caenorhabditis elegans Hypothetical
           protein T07C5.2 protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 344 TIFNDCIDCGVFPDLMKYSKII 409
           T F DC+ CGV   L KY K +
Sbjct: 2   TNFGDCVVCGVSTHLFKYGKYL 23


>L19120-1|AAA28155.1|  815|Caenorhabditis elegans kinesin heavy
           chain protein.
          Length = 815

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 152 ISDAESLLQDHVDKCSVNFKCTNIGIKDIIGYFKLINIKKTGD 280
           ++ A SLL  H+D+C    +    GI ++I  F + +I    D
Sbjct: 540 MNQATSLLNAHLDECGPKIRHFKEGIYNVIREFNIADIASQND 582


>L07144-3|AAK21446.1|  815|Caenorhabditis elegans Uncoordinated
           protein 116 protein.
          Length = 815

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 152 ISDAESLLQDHVDKCSVNFKCTNIGIKDIIGYFKLINIKKTGD 280
           ++ A SLL  H+D+C    +    GI ++I  F + +I    D
Sbjct: 540 MNQATSLLNAHLDECGPKIRHFKEGIYNVIREFNIADIASQND 582


>AB017163-1|BAA32594.1|  815|Caenorhabditis elegans kinesin Heavy
           chain protein.
          Length = 815

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 152 ISDAESLLQDHVDKCSVNFKCTNIGIKDIIGYFKLINIKKTGD 280
           ++ A SLL  H+D+C    +    GI ++I  F + +I    D
Sbjct: 540 MNQATSLLNAHLDECGPKIRHFKEGIYNVIREFNIADIASQND 582


>U58756-6|AAY44007.1|  286|Caenorhabditis elegans Hypothetical
           protein F58F9.9 protein.
          Length = 286

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +2

Query: 332 PYLATIFNDCIDCGVFP-DLMKYSKIIPLFKSGSTFDHSNLRPISVPTTYI 481
           PY+  I N    CG FP D  + S+     K G   D S  +P S  T Y+
Sbjct: 94  PYVPMIINGTSQCGPFPKDTGRSSEAPCCPKDGFWSDWSAYKPNSNNTAYV 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,673,609
Number of Sequences: 27780
Number of extensions: 310464
Number of successful extensions: 653
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)