Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0324
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    26   0.30 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   3.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   3.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   4.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   6.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   6.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.4  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
 Frame = +2

Query: 149 HTNGINAVQSQATCSRNP--HRRTFDNDDEFQETDGTPVGADDNSVRYPDGTVRLRNPNI 322
           H      +   AT  R+P  +R     DD FQE   T     +N + YP  TV     NI
Sbjct: 380 HLESFGVMGDSATAMRDPIFYRWHSYIDDIFQEYKATLPRYTENQLNYPGITV----SNI 435

Query: 323 ELMDQ 337
           E+  Q
Sbjct: 436 EVQSQ 440


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 529 ILHV*SWPGTFYKSRYGH 582
           IL V + P  FY+SRY H
Sbjct: 10  ILAVSAAPAEFYESRYDH 27


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = +2

Query: 131 ITKMNGHTNGINAVQSQATCSRNPHRRTFDNDDEFQETDGTPVGADDNSVRYP 289
           + K N  +  + A+ ++    + P  + ++N   FQ+ D     A++NSV  P
Sbjct: 116 LDKKNDDSPALRALLTRPQAKKTPPNQ-YEN---FQQYDNNNFSAEENSVSEP 164


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = +2

Query: 131 ITKMNGHTNGINAVQSQATCSRNPHRRTFDNDDEFQETDGTPVGADDNSVRYP 289
           + K N  +  + A+ ++    + P  + ++N   FQ+ D     A++NSV  P
Sbjct: 116 LDKKNDDSPALRALLTRPQAKKTPPNQ-YEN---FQQYDNNNFSAEENSVSEP 164


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -1

Query: 319 VRVTQSDSAIWVSNGIVVGSYRSSIGFLKF 230
           V  TQ D     S G   G Y +  GF+ F
Sbjct: 770 VNKTQFDIGAPASGGGTPGKYTAEAGFMSF 799


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 179 QATCSRNPHRRTFDNDDE-FQETDGTPVGADDNSVRYP 289
           +A  +R   ++T  N  E FQ+ D     A++NSV  P
Sbjct: 127 RALLTRPQAKKTPPNQYENFQQYDNNNFSAEENSVSEP 164


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 270 TIPLDTQMALSDCVTLTLNSWTKIFSTIWPLGAAPMILL 386
           +IP  T + LSD + L   SW  +F     LGAA  + L
Sbjct: 216 SIPAFTCLPLSDQLLLLEESWLDLF----VLGAAQFLPL 250


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 270 TIPLDTQMALSDCVTLTLNSWTKIFSTIWPLGAAPMILL 386
           +IP  T + LSD + L   SW  +F     LGAA  + L
Sbjct: 216 SIPAFTCLPLSDQLLLLEESWLDLF----VLGAAQFLPL 250


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 457 CVCELFHAFRCSAHAHKLDVSKHLNK 380
           C+CEL+ AF    +   LD    +++
Sbjct: 315 CLCELYMAFMDRLYFSNLDKDAFIHR 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,569
Number of Sequences: 336
Number of extensions: 4974
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)