Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0322
         (815 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0244 - 1844161-1844241,1844356-1844394,1844510-1844617,184...    31   1.4  
10_08_0731 + 20161962-20163628,20163721-20163862,20164181-201644...    29   4.4  
04_04_0397 - 24921892-24922947,24923486-24923734,24923807-249241...    29   5.8  
04_01_0084 - 912255-912368,912738-912822,914050-917105,920290-92...    29   5.8  
02_01_0679 - 5048653-5051394                                           28   7.7  

>06_01_0244 -
           1844161-1844241,1844356-1844394,1844510-1844617,
           1844638-1844685,1845058-1845111,1845214-1845268,
           1845442-1845522,1846238-1846615,1847196-1847401
          Length = 349

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 94  IVWIPEKPVGRRGSYTIEKSDGSGFTERY 180
           ++W+ + P GRRGSY I + D SG    Y
Sbjct: 139 VIWVHKPPEGRRGSYHI-RMDRSGLFHTY 166


>10_08_0731 + 20161962-20163628,20163721-20163862,20164181-20164490,
            20164566-20166466,20166557-20166650,20166953-20167440,
            20167919-20168599,20168870-20168944,20170148-20170210,
            20170588-20170633,20171373-20171420,20171484-20171557
          Length = 1862

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = +1

Query: 106  PEKPVGRRGSYTIEKSDGSGFTERYQNSEVVP-VENGVIRTAESGERGGTCSEERSSELI 282
            PE    +  + T  +SDGS    + Q   + P V+NG+  + E           R++ + 
Sbjct: 1472 PENKAAKLEAMTATRSDGSSLRSQKQQHALEPKVDNGLAMSEEEAAAFAAAEAARAAAIA 1531

Query: 283  KADGY 297
             A  Y
Sbjct: 1532 AAQAY 1536


>04_04_0397 -
           24921892-24922947,24923486-24923734,24923807-24924157,
           24924244-24924331,24924466-24924563,24925141-24925362,
           24925490-24925585,24926410-24926481,24927156-24927305
          Length = 793

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 440 EEWEQPIVQLMPRPRSLVPQPLLLPEISELNKP 538
           + WE P  + MPR  SL  Q  LL + S +NKP
Sbjct: 520 DNWEVPRSKSMPRGDSLRNQGPLLNKPSSINKP 552


>04_01_0084 -
           912255-912368,912738-912822,914050-917105,920290-920508
          Length = 1157

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 233 LSAVLITPFSTGTTSLFWY 177
           +  V+ TP STG+ S+FWY
Sbjct: 883 IEGVVFTPPSTGSNSIFWY 901


>02_01_0679 - 5048653-5051394
          Length = 913

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +1

Query: 97  VWIPEKPVGRRGSYTIEKSDGSGFTERYQNSEVVPVENGVI 219
           +WI E  V +RG  T+E+     FTE  Q S +  VEN  I
Sbjct: 451 LWIVEGFVIQRGQSTLEEVADGYFTELIQQSMMQLVENDEI 491


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,785,361
Number of Sequences: 37544
Number of extensions: 329924
Number of successful extensions: 1050
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)