Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0322
         (815 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7666| Best HMM Match : Cps15 (HMM E-Value=0.93)                     33   0.28 
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)                 32   0.64 
SB_46125| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.5  
SB_58914| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.0  
SB_49427| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.9  
SB_37941| Best HMM Match : Peptidase_M14 (HMM E-Value=0)               28   7.9  

>SB_7666| Best HMM Match : Cps15 (HMM E-Value=0.93)
          Length = 1062

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
 Frame = +1

Query: 55  VTPEPVQETLTQEIVWIPEKPVGRRGSYTIEKSDGSGFTERYQNSEVVP-VENGVIRTAE 231
           V    V+E + QE+  + E+ V +     +E++  +GF      + ++P +  GV+    
Sbjct: 49  VVENAVEEVVEQEVEEVVEQEVEQGIEAAVEEAAENGFWRNILTTNILPAIIAGVVAGVS 108

Query: 232 SG---------ERGGTCSEERSSELIKADGYEQSVVKNV 321
           SG         E  G C EE++ E +KA      VV N+
Sbjct: 109 SGLILDNIHKAEESGNC-EEKTKESMKAASKVLQVVNNI 146


>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
          Length = 1265

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
 Frame = +1

Query: 31  ENDVRSTT--VTPEPVQETLTQEIVWIPEKPVGRRGSYTIEKSDGSGFT---ERYQNSEV 195
           EN+  ST   VTP  V E + Q  V    KP          ++  +G     ER ++S+ 
Sbjct: 518 ENNKTSTAPLVTPTEVDEMVKQSAVVKETKPNNVIEETVESETTVNGLESDPERLKSSQG 577

Query: 196 VPVENGVIRTAESGERGGTCSEERSSELIKADGYEQSVVKNVKNANAHERNQKATEEVRT 375
             V+  V    +  ++G    +E      KAD  +    +  K  +   + ++  EEV  
Sbjct: 578 TTVDQSVKDVPKKKKKGKQRFQEMEKRSDKADLMDAYTERPEKEVSKEPQTEQEEEEV-D 636

Query: 376 DTDVQHLPN 402
           DT  +H+P+
Sbjct: 637 DTAEEHVPS 645


>SB_46125| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1564

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
 Frame = +1

Query: 25  RHENDVRSTTVTPEPVQ---ETLTQEIVWIP 108
           R+ + +RSTT TP+P +   +TLTQE+V  P
Sbjct: 46  RYTSHMRSTTSTPDPPKSRAQTLTQELVSPP 76


>SB_58914| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 96

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 52  TVTPEPVQETLTQEIVWIPEKPVGRR 129
           T  P P + T+ Q+ +WIP+  V RR
Sbjct: 64  TSDPPPQKNTIVQDKIWIPDSLVTRR 89


>SB_49427| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1958

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
 Frame = +3

Query: 51   NGHPGACPRNADA-----RNRLDSGKTSWTSR 131
            NGHPGA     DA     RN  DSG   W  R
Sbjct: 1246 NGHPGAALNTWDAALTQLRNHFDSGARQWLLR 1277


>SB_37941| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
          Length = 1328

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 10/99 (10%)
 Frame = +1

Query: 103 IPEKPVGRRGSYTIEKSDGSGFTERYQNSEVVPVENGVI---RTAESGERGGTCSEE--- 264
           I EKPV    + T    DG+  TE  + S   P E          ++ E   TCS +   
Sbjct: 580 IKEKPVSANSTQTDTAQDGTTKTEIEETSNSEPTEKSHTDKDDDRQNVETDKTCSIQNLE 639

Query: 265 ----RSSELIKADGYEQSVVKNVKNANAHERNQKATEEV 369
               R  E ++ D  E    K+   AN  + N +   E+
Sbjct: 640 TNKCRCGETLETDKREGGQNKDTSKANNTDENMELDSEI 678


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,172,663
Number of Sequences: 59808
Number of extensions: 392866
Number of successful extensions: 1185
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2275631710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)