Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0322
         (815 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   4.5  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    22   7.8  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    22   7.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.8  

>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +1

Query: 142 IEKSDGSGFTERYQNSEVVPVENGVIRTAESGERGGTCSEERSSELIKAD-GYEQSVVKN 318
           IEKS+         ++ +    +G   T+    R  +CS +R+ E  K D  YE+  + N
Sbjct: 189 IEKSENESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK--LHN 246

Query: 319 VKNANAHERNQK 354
            K     ER  +
Sbjct: 247 EKEKLLEERTSR 258


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = +1

Query: 142 IEKSDGSGFTERYQNSEVVPVENGVIRTAESGERGGTCSEERSSELIKAD-GYEQSVVKN 318
           IEKS          ++ +    +G   T+    R  +CS +R+ E  K D  YE+  + N
Sbjct: 200 IEKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK--LHN 257

Query: 319 VKNANAHERNQK 354
            K     ER  +
Sbjct: 258 EKEKFLEERTSR 269


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = +1

Query: 142 IEKSDGSGFTERYQNSEVVPVENGVIRTAESGERGGTCSEERSSELIKAD-GYEQSVVKN 318
           IEKS          ++ +    +G   T+    R  +CS +R+ E  K D  YE+  + N
Sbjct: 200 IEKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEK--LHN 257

Query: 319 VKNANAHERNQK 354
            K     ER  +
Sbjct: 258 EKEKFLEERTSR 269


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/41 (19%), Positives = 17/41 (41%)
 Frame = +1

Query: 295 YEQSVVKNVKNANAHERNQKATEEVRTDTDVQHLPNGGIAK 417
           Y+Q   +  +     E  +   +E++ +       NGG A+
Sbjct: 163 YQQQQQQQQRQQQRQEERRLRPDEIKVEVGEDEFANGGAAR 203


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,118
Number of Sequences: 438
Number of extensions: 3771
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)