Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0321
         (841 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahym...    37   0.55 
UniRef50_Q38F08 Cluster: Putative uncharacterized protein; n=1; ...    33   6.8  
UniRef50_Q7M884 Cluster: Sensor protein; n=1; Wolinella succinog...    33   8.9  
UniRef50_Q60XG7 Cluster: Putative uncharacterized protein CBG186...    33   8.9  
UniRef50_O18184 Cluster: Putative uncharacterized protein; n=2; ...    33   8.9  

>UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahymena
           thermophila SB210|Rep: KOW motif family protein -
           Tetrahymena thermophila SB210
          Length = 778

 Score = 37.1 bits (82), Expect = 0.55
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 645 WNCKFVHYYDCLLYFYNHKFRQDYTFQNIIN 553
           + C+ +H Y  L++ +N KFR  YT +NI N
Sbjct: 625 YQCQVIHVYKSLVFLFNPKFRDTYTVENINN 655


>UniRef50_Q38F08 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 84

 Score = 33.5 bits (73), Expect = 6.8
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +2

Query: 218 VTKRVYILVFFGFYHCIYILIHEAKTLYPFLRKLRGRRSMIFSTLIENIEKKCKTLIFFK 397
           +TK +  L+F+ ++ C +  IH   + YP L     R  M F   +    ++C+    F+
Sbjct: 1   MTKSLQPLLFYWYFQCFFSFIH---SFYPSLSLFVTRGIMQFQAQMSKRTQRCRKTYHFQ 57

Query: 398 NNA 406
           +NA
Sbjct: 58  SNA 60


>UniRef50_Q7M884 Cluster: Sensor protein; n=1; Wolinella
           succinogenes|Rep: Sensor protein - Wolinella
           succinogenes
          Length = 409

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 21/66 (31%), Positives = 35/66 (53%)
 Frame = +2

Query: 125 KDTDKIYV*ISVT*IIRERV*DKVYTDTLFTVTKRVYILVFFGFYHCIYILIHEAKTLYP 304
           +D + IY+ +       ERV   +Y D+  TV K  Y+L F  F+  +++ +   K+L P
Sbjct: 102 RDNESIYLLLQTP----ERV--TLYRDSFKTVFKNYYLLTFIAFFIVVFLYVLVIKSLLP 155

Query: 305 FLRKLR 322
            L+ LR
Sbjct: 156 -LKSLR 160


>UniRef50_Q60XG7 Cluster: Putative uncharacterized protein CBG18673;
           n=3; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG18673 - Caenorhabditis
           briggsae
          Length = 375

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -3

Query: 671 VVEIRL*LIGIVSLYTIMIVFY--TSIITNFAKTTLSKILSMTNNI*SILNLTTDVKNKS 498
           V E+   L+G++++    I FY  T    NF+K T+  IL +  +I S+L L    KN+ 
Sbjct: 159 VTEVNQFLLGLLAIQRFFIYFYPSTEKYLNFSKRTMKWILIIAYSI-SVLELVHVFKNED 217

Query: 497 LTINSMH 477
            +I+ ++
Sbjct: 218 YSISYVY 224


>UniRef50_O18184 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 321

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 18/60 (30%), Positives = 25/60 (41%)
 Frame = +2

Query: 308 LRKLRGRRSMIFSTLIENIEKKCKTLIFFKNNA*KIH*IDKENITHTTYHVFDAHTHAYY 487
           L K   +   I S + +   K C+  IFF NN        K    +T YHV  +  H Y+
Sbjct: 70  LHKATHKPENIISAITDGYAKLCQETIFFTNNQKLFDKFQKFQNNYTMYHVDSSLNHFYW 129


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,690,657
Number of Sequences: 1657284
Number of extensions: 14198252
Number of successful extensions: 30567
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30465
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)